myRT

myRT report for GCA_003025625.1_ASM302562v1

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Seq: PYMK01000010.1 Photobacterium aquimaris strain BS2 CFSAN065502_10, whole genome shotgun sequence (181698 bp)
Overview 1 RT 1: 171144-178412 bp Neighborhood of RT #1 [171144, 178412] PRK09009 RVT-UG1 Feature: gene Location: 171144-171905 bp Feature: domain Description: PRK09009 Location: 171201-171903 bp Feature: domain Description: PRK09009 Location: 1 71 201 -1 71 903 bp Feature: gene Location: 172330-172785 bp Feature: gene Location: 172778-176506 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 173399-173888 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 73399-1 73888 bp Feature: gene Location: 177229-177822 bp Feature: gene Location: 178062-178412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09009 (SDR family oxidoreductase), RVT-UG1

Seq: PYMK01000035.1 Photobacterium aquimaris strain BS2 CFSAN065502_35, whole genome shotgun sequence (19212 bp)
Overview 1 RT 1: 13432-16830 bp Neighborhood of RT #1 [13432, 16830] RVT-GII RVT_N RVT-GII DUF2971 Feature: gene Location: 13432-13707 bp Feature: gene Location: 13755-13946 bp Feature: gene Location: 13955-14200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13961-14186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13961-14186 bp Feature: gene Location: 14231-14821 bp Feature: domain Description: RVT_N Location: 14279-14522 bp Feature: domain Description: RVT_N Location: 142 79-1452 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14567-14819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14567-14819 bp Feature: gene Location: 15563-16381 bp Feature: domain Description: DUF2971 Location: 15887-16175 bp Feature: domain Description: DUF2 971 Location: 15887-16175 bp Feature: gene Location: 16408-16830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), DUF2971 (pfam11185)

Seq: PYMK01000036.1 Photobacterium aquimaris strain BS2 CFSAN065502_36, whole genome shotgun sequence (17029 bp)
Overview 1 RT 1: 258-10769 bp Neighborhood of RT #1 [258, 10912] PRK15137 SMC_N RVT_N RVT-GII GIIM McrBC Feature: gene Location: 258-1055 bp Feature: domain Description: PRK15137 Location: 312-1050 bp Feature: domain Description: PRK1513 7 Location: 3 12-1050 bp Feature: gene Location: 1273-3996 bp Feature: domain Description: SMC_N Location: 1603-3478 bp Feature: domain Description: SMC_N Location: 1603 -3 478 bp Feature: gene Location: 4754-6223 bp Feature: domain Description: RVT_N Location: 4802-5045 bp Feature: domain Description: RVT_N Location: 4802-5045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5090-5714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5090-5714 bp Feature: domain Description: GIIM Note: maturase Location: 5774-5999 bp Feature: domain Description: GIIM Note: maturase Location: 5774-5999 bp Feature: gene Location: 6526-9315 bp Feature: gene Location: 9617-10912 bp Feature: domain Description: McrBC Location: 9782-10769 bp Feature: domain Description: McrBC Location: 9782-10769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15137 (DNA-specific endonuclease I; Provisional), SMC_N (pfam02463), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrBC (pfam10117)

Seq: PYMK01000053.1 Photobacterium aquimaris strain BS2 CFSAN065502_53, whole genome shotgun sequence (2065 bp)
Overview 1 RT 1: 721-1816 bp Neighborhood of RT #1 [721, 2040] RVT_N RVT-GII GIIM Feature: gene Location: 721-2040 bp Feature: domain Description: RVT_N Location: 745-859 bp Feature: domain Description: RVT_N Location: 74 5-859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904 -1531 bp Feature: domain Description: GIIM Note: maturase Location: 1591-1816 bp Feature: domain Description: GIIM Note: maturase Location: 1591-1816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)