myRT

myRT report for GCA_003025735.1_ASM302573v1

Download annotations/find similar RTs

Seq: PYMT01000101.1 Photobacterium phosphoreum strain FS-4.1 CFSAN065486_101, whole genome shotgun sequence (2625 bp)
Overview 1 RT 1: 844-2203 bp Neighborhood of RT #1 [844, 2574] RVT-Retrons Feature: gene Location: 844-1251 bp Feature: gene Location: 1255-1554 bp Feature: gene Location: 1999-2574 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2089-2203 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2089-2203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PYMT01000112.1 Photobacterium phosphoreum strain FS-4.1 CFSAN065486_112, whole genome shotgun sequence (1519 bp)
Overview 1 RT 1: 21-1426 bp Neighborhood of RT #1 [21, 1518] RVT-Retrons Feature: gene Location: 21-884 bp Feature: gene Location: 1048-1518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1177-1426 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1177-142 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PYMT01000129.1 Photobacterium phosphoreum strain FS-4.1 CFSAN065486_129, whole genome shotgun sequence (659 bp)
Overview 1 RT 1: 1-649 bp Neighborhood of RT #1 [1, 657] RVT-Retrons Feature: gene Location: 1-657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64-649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64-649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PYMT01000032.1 Photobacterium phosphoreum strain FS-4.1 CFSAN065486_32, whole genome shotgun sequence (48578 bp)
Overview 1 RT 1: 8717-14856 bp Neighborhood of RT #1 [8717, 14867] TIGR02646 COG3950 RVT-Retrons PRK00124 PRK15064 Feature: gene Location: 8717-8962 bp Feature: domain Description: TIGR02646 Location: 8786-8891 bp Feature: domain Description: TIGR0264 6 Location: 8786-8891 bp Feature: gene Location: 8966-10597 bp Feature: domain Description: COG3950 Location: 9164-10547 bp Feature: domain Description: COG3950 Location: 9164 -1054 7 bp Feature: gene Location: 10590-11522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10692-11283 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10692-11283 bp Feature: gene Location: 12656-13111 bp Feature: domain Description: PRK00124 Location: 12659-13100 bp Feature: domain Description: PRK00124 Location: 12659-13100 bp Feature: gene Location: 13236-14867 bp Feature: domain Description: PRK15064 Location: 13275-14856 bp Feature: domain Description: PRK15064 Location: 13275-14 856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK00124 (YaiI/YqxD family protein), PRK15064 (ABC transporter ATP-binding protein; Provisional)

Seq: PYMT01000050.1 Photobacterium phosphoreum strain FS-4.1 CFSAN065486_50, whole genome shotgun sequence (26190 bp)
Overview 1 RT 1: 2486-8261 bp Neighborhood of RT #1 [2486, 8866] YdjM FimT RVT-Retrons REC Feature: gene Location: 2486-3004 bp Feature: domain Description: YdjM Location: 2546-2840 bp Feature: domain Description: YdjM Location: 25 46-2840 bp Feature: gene Location: 3042-3551 bp Feature: domain Description: FimT Location: 3054-3288 bp Feature: domain Description: FimT Location: 305 4-3288 bp Feature: gene Location: 4399-6786 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4555-5194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45 5 5 -5 194 bp Feature: gene Location: 6813-7079 bp Feature: gene Location: 7142-8866 bp Feature: domain Description: REC Location: 7910-8261 bp Feature: domain Description: REC Location: 7910-8261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdjM (pfam04307), FimT (COG4970), RVT-Retrons, REC (smart00448)

Seq: PYMT01000008.1 Photobacterium phosphoreum strain FS-4.1 CFSAN065486_8, whole genome shotgun sequence (128931 bp)
Overview 1 RT 1: 66970-71719 bp Neighborhood of RT #1 [66970, 71719] PRK06090 PRK10812 RVT-UG2 Feature: gene Location: 66970-67932 bp Feature: domain Description: PRK06090 Location: 66976-67915 bp Feature: domain Description: PRK06 090 Location: 6 6 976 -6 7915 bp Feature: gene Location: 68001-68777 bp Feature: domain Description: PRK10812 Location: 68004-68769 bp Feature: domain Description: PRK10812 Location: 6 8004-6 876 9 bp Feature: gene Location: 68999-70309 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 69200-70013 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6 9200-70013 bp Feature: gene Location: 70441-70572 bp Feature: gene Location: 70754-71719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06090 (DNA polymerase III subunit delta'; Validated), PRK10812 (putative DNAse; Provisional), RVT-UG2