myRT

myRT report for GCA_003026015.1_ASM302601v1

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Seq: PYNN01000032.1 Photobacterium leiognathi subsp. mandapamensis strain PL-721 SRR6427411_1_contig_32, whole genome shotgun sequence (74611 bp)
Overview 1 RT 1: 31545-36889 bp Neighborhood of RT #1 [31545, 36894] OYE_like_FMN RVT-UG2 Chi1 DUF5011 DUF5011 ChiC_BD PRK13211 Feature: gene Location: 31545-32582 bp Feature: domain Description: OYE_like_FMN Location: 31563-32556 bp Feature: domain Description: OYE_like_FMN Location: 31 563-32556 bp Feature: gene Location: 32929-33075 bp Feature: gene Location: 33344-34117 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 33548-34109 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 33548-341 09 bp Feature: gene Location: 34288-34626 bp Feature: gene Location: 34696-36894 bp Feature: domain Description: Chi1 Location: 34744-35728 bp Feature: domain Description: Chi1 Location: 34744-35728 bp Feature: domain Description: DUF5011 Location: 35767-35974 bp Feature: domain Description: DUF501 1 Location: 35767-35974 bp Feature: domain Description: DUF5011 Location: 35992-36205 bp Feature: domain Description: DUF501 1 Location: 35992-36205 bp Feature: domain Description: ChiC_BD Location: 36235-36361 bp Feature: domain Description: ChiC_BD Location: 36235-36361 bp Feature: domain Description: PRK13211 Location: 36403-36889 bp Feature: domain Description: PRK1 321 1 Location: 36403-36889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OYE_like_FMN (cd02933), RVT-UG2, Chi1 (COG3469), DUF5011 (pfam16403), ChiC_BD (cd12215), PRK13211 (N-acetylglucosamine-binding protein GbpA)

Seq: PYNN01000005.1 Photobacterium leiognathi subsp. mandapamensis strain PL-721 SRR6427411_1_contig_5, whole genome shotgun sequence (877674 bp)
Overview 1 RT 1: 740451-747985 bp Neighborhood of RT #1 [740451, 747985] AAA_13 AAA_13 RVT-AbiP2 PRK09692 INT_P4_C Feature: gene Location: 740451-740834 bp Feature: gene Location: 740938-743523 bp Feature: domain Description: AAA_13 Location: 741235-741301 bp Feature: domain Description: AAA_13 Location: 7412 35-741301 bp Feature: domain Description: AAA_13 Location: 742057-743251 bp Feature: domain Description: AAA_13 Location: 742 057-7432 51 bp Feature: gene Location: 743603-745129 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 744032-744491 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 744032 -744491 bp Feature: gene Location: 745561-746853 bp Feature: domain Description: PRK09692 Location: 745570-746020 bp Feature: domain Description: PRK09692 Location: 745570-74602 0 bp Feature: domain Description: INT_P4_C Location: 746284-746809 bp Feature: domain Description: INT_P4_C Location: 7462 84-746809 bp Feature: gene Location: 747446-747985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), RVT-AbiP2, PRK09692 (Integrase; provisional), INT_P4_C (cd00801)