myRT

myRT report for GCA_003026095.1_ASM302609v1

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Seq: PYNV01000027.1 Photobacterium sp. GB-72 CFSAN065452_27, whole genome shotgun sequence (34116 bp)
Overview 1 RT 1: 27064-32779 bp Neighborhood of RT #1 [27064, 32779] LbH_XAT PRK12440 RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 27064-27726 bp Feature: domain Description: LbH_XAT Location: 27133-27640 bp Feature: domain Description: LbH_XAT Location: 271 33-27640 bp Feature: gene Location: 28155-29360 bp Feature: domain Description: PRK12440 Location: 28158-29352 bp Feature: domain Description: PRK1 2440 Location: 281 58-29352 bp Feature: gene Location: 29660-30370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29669-29861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29669-29861 bp Feature: domain Description: GIIM Note: maturase Location: 29918-30146 bp Feature: domain Description: GIIM Note: maturase Location: 2991 8-301 46 bp Feature: gene Location: 30403-31161 bp Feature: domain Description: RVT_N Location: 30493-30736 bp Feature: domain Description: RVT_N Location: 30493-30736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30781-31105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30781 -31 1 05 bp Feature: gene Location: 31229-31471 bp Feature: gene Location: 31880-32779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_XAT (cd03349), PRK12440 (acetate/propionate family kinase), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: PYNV01000055.1 Photobacterium sp. GB-72 CFSAN065452_55, whole genome shotgun sequence (626 bp)
Overview 1 RT 1: 3-624 bp Neighborhood of RT #1 [3, 623] RVT-GII Feature: gene Location: 3-623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-62 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYNV01000007.1 Photobacterium sp. GB-72 CFSAN065452_7, whole genome shotgun sequence (189967 bp)
Overview 1 RT 1: 13266-21224 bp Neighborhood of RT #1 [13266, 21238] PRK09692 RVT-UG2 COG0610 RMtype1_S_Sau13435ORF2165P_TRD2-CR2_like RMtype1_S_EcoUTORF5051P-TRD2-CR2_like Feature: gene Location: 13266-14510 bp Feature: domain Description: PRK09692 Location: 13278-14502 bp Feature: domain Description: PRK09692 Location: 13 278-14502 bp Feature: gene Location: 14720-15013 bp Feature: gene Location: 15256-16911 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15631-16612 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1563 1-16612 bp Feature: gene Location: 16977-20039 bp Feature: domain Description: COG0610 Location: 16986-19143 bp Feature: domain Description: COG0610 Location: 16986-19143 bp Feature: gene Location: 20048-21238 bp Feature: domain Description: RMtype1_S_Sau13435ORF2165P_TRD2-CR2_like Location: 20324-20561 bp Feature: domain Description: RMtype1_S_Sau13 43 5ORF2165P_TRD2-CR2_like Location: 203 24-20561 bp Feature: domain Description: RMtype1_S_EcoUTORF5051P-TRD2-CR2_like Location: 20669-21224 bp Feature: domain Description: RMtype1_S_EcoUTORF5051P-TRD2-CR2_like Location: 20669-21224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG2, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RMtype1_S_Sau13435ORF2165P_TRD2-CR2_like (cd17521), RMtype1_S_EcoUTORF5051P-TRD2-CR2_like (cd17524)