myRT

myRT report for GCA_003026735.1_ASM302673v1

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Seq: PYNR01000001.1 Photobacterium leiognathi subsp. mandapamensis strain ajapo.3.1 CFSAN065456_1, whole genome shotgun sequence (480625 bp)
Overview 1 RT 1: 324683-329536 bp Neighborhood of RT #1 [324683, 329553] DUF5462 RVT-UG4 HTH_ARAC Feature: gene Location: 324683-325207 bp Feature: domain Description: DUF5462 Location: 324776-325193 bp Feature: domain Description: DUF5462 Location: 324776-3251 93 bp Feature: gene Location: 325270-326142 bp Feature: gene Location: 326743-327375 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 327082-327355 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 327082-327355 bp Feature: gene Location: 327660-328556 bp Feature: gene Location: 328780-329553 bp Feature: domain Description: HTH_ARAC Location: 329290-329536 bp Feature: domain Description: HTH_ARAC Location: 329290-329536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5462 (pfam17547), RVT-UG4, HTH_ARAC (smart00342)

Seq: PYNR01000020.1 Photobacterium leiognathi subsp. mandapamensis strain ajapo.3.1 CFSAN065456_19, whole genome shotgun sequence (92838 bp)
Overview 1 RT 1: 103-2173 bp Neighborhood of RT #1 [103, 2173] RVT-UG2 Feature: gene Location: 103-231 bp Feature: gene Location: 277-1560 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 481-1264 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 481-12 64 bp Feature: gene Location: 1646-1828 bp Feature: gene Location: 2009-2173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: PYNR01000038.1 Photobacterium leiognathi subsp. mandapamensis strain ajapo.3.1 CFSAN065456_37, whole genome shotgun sequence (1939 bp)
Overview 1 RT 1: 1-1702 bp Neighborhood of RT #1 [1, 1702] RVT_N RVT-GII GIIM Feature: gene Location: 1-1350 bp Feature: domain Description: RVT_N Location: 49-292 bp Feature: domain Description: RVT_N Location: 49-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 7-964 bp Feature: domain Description: GIIM Note: maturase Location: 1021-1249 bp Feature: domain Description: GIIM Note: maturase Location: 1021-1249 bp Feature: gene Location: 1460-1702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)