myRT

myRT report for GCA_003027035.1_ASM302703v1

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Seq: PYPB01000011.1 Photobacterium kishitanii strain A1-2 CFSAN065420_11, whole genome shotgun sequence (183649 bp)
Overview 1 RT 1: 41423-46749 bp 2 RT 2: 181217-183424 bp Neighborhood of RT #1 [41423, 46772] Aes RVT_N RVT-GII GIIM PRK10119 DUF3316 Neighborhood of RT #2 [181217, 183648] PRK10562 INT_RitA_C_like RVT-GII GIIM Feature: gene Location: 41423-42385 bp Feature: domain Description: Aes Location: 41489-42374 bp Feature: domain Description: Aes Location: 41 489-42374 bp Feature: gene Location: 42765-42908 bp Feature: gene Location: 43143-44615 bp Feature: domain Description: RVT_N Location: 43191-43434 bp Feature: domain Description: RVT_N Location: 431 91 -43434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43479-44106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43479-441 06 bp Feature: domain Description: GIIM Note: maturase Location: 44166-44391 bp Feature: domain Description: GIIM Note: maturase Location: 441 66-44391 bp Feature: gene Location: 45116-45814 bp Feature: domain Description: PRK10119 Location: 45194-45809 bp Feature: domain Description: PRK1 01 1 9 Location: 451 94-45809 bp Feature: gene Location: 46422-46772 bp Feature: domain Description: DUF3316 Location: 46428-46749 bp Feature: domain Description: DUF331 6 Location: 46428-46749 bp Feature: gene Location: 181217-181648 bp Feature: domain Description: PRK10562 Location: 181220-181643 bp Feature: domain Description: PRK1 0562 Location: 1 81 220-1 81 643 bp Feature: gene Location: 181938-182534 bp Feature: domain Description: INT_RitA_C_like Location: 181983-182517 bp Feature: domain Description: INT_RitA_C_like Location: 1 81 983-1 8251 7 bp Feature: gene Location: 182728-183648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182731-183139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 82731 -1 831 39 bp Feature: domain Description: GIIM Note: maturase Location: 183199-183424 bp Feature: domain Description: GIIM Note: maturase Location: 1 831 99-1 83424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aes (COG0657), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK10119 (putative hydrolase; Provisional), DUF3316 (pfam11777), PRK10562 (putative acetyltransferase; Provisional), INT_RitA_C_like (cd01188)

Seq: PYPB01000005.1 Photobacterium kishitanii strain A1-2 CFSAN065420_5, whole genome shotgun sequence (292076 bp)
Overview 1 RT 1: 2259-7648 bp Neighborhood of RT #1 [2259, 7701] phage_xxxx phage_xxxx RVT-UG1 ALP_N-acyl_transferase Phage_holin_2_3 Feature: gene Location: 2259-2867 bp Feature: domain Description: phage_xxxx Location: 2265-2460 bp Feature: domain Description: phage_xxxx Location: 2 2 65-2 460 bp Feature: domain Description: phage_xxxx Location: 2541-2682 bp Feature: domain Description: phage_xxxx Location: 2 541-2 682 bp Feature: gene Location: 2964-3719 bp Feature: gene Location: 3902-6847 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3905-4136 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3905-4136 bp Feature: domain Description: ALP_N-acyl_transferase Location: 5990-6350 bp Feature: domain Description: ALP_N-acyl_transferase Location: 5990-6350 bp Feature: gene Location: 6844-7299 bp Feature: gene Location: 7486-7701 bp Feature: domain Description: Phage_holin_2_3 Location: 7495-7648 bp Feature: domain Description: Phage_holin_2 _3 Location: 7495-7648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_xxxx (TIGR02642), RVT-UG1, ALP_N-acyl_transferase (cd07571), Phage_holin_2_3 (pfam16080)