myRT

myRT report for GCA_003027055.1_ASM302705v1

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Seq: PYPC01000001.1 Photobacterium kishitanii strain A1-1 CFSAN065419_1, whole genome shotgun sequence (1149129 bp)
Overview 1 RT 1: 47820-53209 bp Neighborhood of RT #1 [47820, 53262] phage_xxxx phage_xxxx RVT-UG1 ALP_N-acyl_transferase Phage_holin_2_3 Feature: gene Location: 47820-48428 bp Feature: domain Description: phage_xxxx Location: 47826-48021 bp Feature: domain Description: phage_xxxx Location: 47826-48021 bp Feature: domain Description: phage_xxxx Location: 48102-48243 bp Feature: domain Description: phage_xxxx Location: 481 02-48243 bp Feature: gene Location: 48525-49280 bp Feature: gene Location: 49463-52408 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 49466-49697 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 49466-49697 bp Feature: domain Description: ALP_N-acyl_transferase Location: 51551-51911 bp Feature: domain Description: ALP_N-acyl_transferase Location: 51 551 -51 91 1 bp Feature: gene Location: 52405-52860 bp Feature: gene Location: 53047-53262 bp Feature: domain Description: Phage_holin_2_3 Location: 53056-53209 bp Feature: domain Description: Phage_holin_2_3 Location: 53056-53209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_xxxx (TIGR02642), RVT-UG1, ALP_N-acyl_transferase (cd07571), Phage_holin_2_3 (pfam16080)

Seq: PYPC01000021.1 Photobacterium kishitanii strain A1-1 CFSAN065419_21, whole genome shotgun sequence (80804 bp)
Overview 1 RT 1: 26890-32228 bp 2 RT 2: 72133-76844 bp Neighborhood of RT #1 [26890, 32239] DUF3316 PRK10119 RVT_N RVT-GII GIIM Aes Neighborhood of RT #2 [72133, 76849] Arginase RVT_N RVT-GII GIIM INT_RitA_C_like PRK10562 Feature: gene Location: 26890-27240 bp Feature: domain Description: DUF3316 Location: 26896-27217 bp Feature: domain Description: DUF3316 Location: 2 6896-2 72 17 bp Feature: gene Location: 27848-28546 bp Feature: domain Description: PRK10119 Location: 27926-28541 bp Feature: domain Description: PRK10119 Location: 2 792 6-2 8541 bp Feature: gene Location: 29047-30519 bp Feature: domain Description: RVT_N Location: 29095-29338 bp Feature: domain Description: RVT_N Location: 2 9095-2 9338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29383-30010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9383-30010 bp Feature: domain Description: GIIM Note: maturase Location: 30070-30295 bp Feature: domain Description: GIIM Note: maturase Location: 30070-302 95 bp Feature: gene Location: 30754-30897 bp Feature: gene Location: 31277-32239 bp Feature: domain Description: Aes Location: 31343-32228 bp Feature: domain Description: Aes Location: 31343-32 2 2 8 bp Feature: gene Location: 72133-73056 bp Feature: domain Description: Arginase Location: 72154-73036 bp Feature: domain Description: Arginase Location: 72 154-73036 bp Feature: gene Location: 73488-73631 bp Feature: gene Location: 73866-75338 bp Feature: domain Description: RVT_N Location: 73914-74157 bp Feature: domain Description: RVT_N Location: 73914-74157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74202-74829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 02 -7482 9 bp Feature: domain Description: GIIM Note: maturase Location: 74889-75114 bp Feature: domain Description: GIIM Note: maturase Location: 74889-75114 bp Feature: gene Location: 75532-76128 bp Feature: domain Description: INT_RitA_C_like Location: 75577-76111 bp Feature: domain Description: INT_RitA_C_like Location: 75577-76111 bp Feature: gene Location: 76418-76849 bp Feature: domain Description: PRK10562 Location: 76421-76844 bp Feature: domain Description: PRK10562 Location: 7642 1-76844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3316 (pfam11777), PRK10119 (putative hydrolase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Aes (COG0657), Arginase (pfam00491), INT_RitA_C_like (cd01188), PRK10562 (putative acetyltransferase; Provisional)