myRT

myRT report for GCA_003027115.1_ASM302711v1

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Seq: PYOZ01000010.1 Photobacterium kishitanii strain A1-4 CFSAN065422_10, whole genome shotgun sequence (184398 bp)
Overview 1 RT 1: 32492-37830 bp 2 RT 2: 77735-82446 bp Neighborhood of RT #1 [32492, 37841] DUF3316 PRK10119 RVT_N RVT-GII GIIM Aes Neighborhood of RT #2 [77735, 82451] Arginase RVT_N RVT-GII GIIM INT_RitA_C_like PRK10562 Feature: gene Location: 32492-32842 bp Feature: domain Description: DUF3316 Location: 32498-32819 bp Feature: domain Description: DUF331 6 Location: 32498-3281 9 bp Feature: gene Location: 33450-34148 bp Feature: domain Description: PRK10119 Location: 33528-34143 bp Feature: domain Description: PRK1 01 1 9 Location: 33528-341 43 bp Feature: gene Location: 34649-36121 bp Feature: domain Description: RVT_N Location: 34697-34940 bp Feature: domain Description: RVT_N Location: 34697-34940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34985-35612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34985-3561 2 bp Feature: domain Description: GIIM Note: maturase Location: 35672-35897 bp Feature: domain Description: GIIM Note: maturase Location: 35672-35897 bp Feature: gene Location: 36356-36499 bp Feature: gene Location: 36879-37841 bp Feature: domain Description: Aes Location: 36945-37830 bp Feature: domain Description: Aes Location: 36945-37830 bp Feature: gene Location: 77735-78658 bp Feature: domain Description: Arginase Location: 77756-78638 bp Feature: domain Description: Arginase Location: 77756-78638 bp Feature: gene Location: 79090-79233 bp Feature: gene Location: 79468-80940 bp Feature: domain Description: RVT_N Location: 79516-79759 bp Feature: domain Description: RVT_N Location: 7951 6-79759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79804-80431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79804-80431 bp Feature: domain Description: GIIM Note: maturase Location: 80491-80716 bp Feature: domain Description: GIIM Note: maturase Location: 80491 -8071 6 bp Feature: gene Location: 81134-81730 bp Feature: domain Description: INT_RitA_C_like Location: 81179-81713 bp Feature: domain Description: INT_RitA_C_like Location: 81 1 79-81 71 3 bp Feature: gene Location: 82020-82451 bp Feature: domain Description: PRK10562 Location: 82023-82446 bp Feature: domain Description: PRK1 0562 Location: 82023-82446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3316 (pfam11777), PRK10119 (putative hydrolase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Aes (COG0657), Arginase (pfam00491), INT_RitA_C_like (cd01188), PRK10562 (putative acetyltransferase; Provisional)

Seq: PYOZ01000004.1 Photobacterium kishitanii strain A1-4 CFSAN065422_4, whole genome shotgun sequence (409688 bp)
Overview 1 RT 1: 2259-7648 bp Neighborhood of RT #1 [2259, 7701] phage_xxxx phage_xxxx RVT-UG1 ALP_N-acyl_transferase Phage_holin_2_3 Feature: gene Location: 2259-2867 bp Feature: domain Description: phage_xxxx Location: 2265-2460 bp Feature: domain Description: phage_xxxx Location: 2 2 65-2 460 bp Feature: domain Description: phage_xxxx Location: 2541-2682 bp Feature: domain Description: phage_xxxx Location: 2 541-2 682 bp Feature: gene Location: 2964-3719 bp Feature: gene Location: 3902-6847 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3905-4136 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3905-4136 bp Feature: domain Description: ALP_N-acyl_transferase Location: 5990-6350 bp Feature: domain Description: ALP_N-acyl_transferase Location: 5990-6350 bp Feature: gene Location: 6880-7299 bp Feature: gene Location: 7486-7701 bp Feature: domain Description: Phage_holin_2_3 Location: 7495-7648 bp Feature: domain Description: Phage_holin_2 _3 Location: 7495-7648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_xxxx (TIGR02642), RVT-UG1, ALP_N-acyl_transferase (cd07571), Phage_holin_2_3 (pfam16080)