myRT

myRT report for GCA_003027535.1_ASM302753v1

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Seq: PYQT01000001.1 Escherichia albertii strain 20507-2 MOD1-EC4609_1_length_448662_cov_41.430283, whole genome shotgun sequence (448662 bp)
Overview 1 RT 1: 138251-141383 bp Neighborhood of RT #1 [138251, 141502] RhsA YhhI YhhI RVT-GII GIIM YhhI Feature: gene Location: 138251-138433 bp Feature: domain Description: RhsA Location: 138254-138419 bp Feature: domain Description: RhsA Location: 1 38254-1 3841 9 bp Feature: gene Location: 138444-139193 bp Feature: domain Description: YhhI Location: 138510-138834 bp Feature: domain Description: YhhI Location: 1 3851 0-1 38834 bp Feature: domain Description: YhhI Location: 138855-139095 bp Feature: domain Description: YhhI Location: 1 38855-1 39095 bp Feature: gene Location: 139204-140559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139486-140170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39486-1 401 70 bp Feature: domain Description: GIIM Note: maturase Location: 140251-140473 bp Feature: domain Description: GIIM Note: maturase Location: 1 40251 -1 40473 bp Feature: gene Location: 140565-140771 bp Feature: gene Location: 141017-141502 bp Feature: domain Description: YhhI Location: 141020-141383 bp Feature: domain Description: YhhI Location: 1 41 020-1 41 383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: PYQT01000029.1 Escherichia albertii strain 20507-2 MOD1-EC4609_29_length_45287_cov_52.883392, whole genome shotgun sequence (45287 bp)
Overview 1 RT 1: 33317-37524 bp Neighborhood of RT #1 [33317, 37524] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 33317-33484 bp Feature: gene Location: 33604-34038 bp Feature: domain Description: PHA02517 Location: 33652-33973 bp Feature: domain Description: PHA02 517 Location: 33652 -33973 bp Feature: gene Location: 34630-36153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34903-35635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34903-35635 bp Feature: domain Description: GIIM Note: maturase Location: 35710-35908 bp Feature: domain Description: GIIM Note: maturase Location: 35710-35908 bp Feature: gene Location: 36282-36722 bp Feature: domain Description: PHA02517 Location: 36285-36687 bp Feature: domain Description: PHA02 517 Location: 362 85-36687 bp Feature: gene Location: 36901-37524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)