myRT

myRT report for GCA_003033925.1_ASM303392v1

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Seq: CP028365.1 Tannerella sp. oral taxon HOT-286 strain W11666 chromosome (3013600 bp)
Overview 1 RT 1: 920045-926013 bp 2 RT 2: 1665683-1670829 bp 3 RT 3: 1691529-1699628 bp 4 RT 4: 1703657-1709275 bp 5 RT 5: 1971508-1977893 bp 6 RT 6: 2818085-2826800 bp Neighborhood of RT #1 [920045, 926013] DDE_Tnp_1_3 RVT_N RVT-GII GIIM Neighborhood of RT #2 [1665683, 1670829] AbiF RVT_N RVT-GII GIIM Neighborhood of RT #3 [1691529, 1700305] PRK08644 TraG-D_C RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII GIIM YWFCY Relaxase Neighborhood of RT #4 [1703657, 1709275] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #5 [1971508, 1977893] DUF4141 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #6 [2818085, 2826859] PRK05218 RVT_N RVT-GII GIIM dnaK AbiF Feature: gene Location: 920045-920269 bp Feature: domain Description: DDE_Tnp_1_3 Location: 920054-920150 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 920054-9201 50 bp Feature: gene Location: 922112-923308 bp Feature: gene Location: 923292-924959 bp Feature: RT Description: RVT_N Location: 923346-923589 bp Feature: RT Description: RVT_N Location: 923346-923589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 923634-924282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 923634-924282 bp Feature: domain Description: GIIM Note: maturase Location: 924336-924567 bp Feature: domain Description: GIIM Note: maturase Location: 924336-924567 bp Feature: gene Location: 925076-925255 bp Feature: gene Location: 925612-926013 bp Feature: gene Location: 1665683-1666612 bp Feature: domain Description: AbiF Location: 1665692-1666589 bp Feature: domain Description: AbiF Location: 1 665692-1 666589 bp Feature: gene Location: 1666657-1667877 bp Feature: gene Location: 1667861-1669528 bp Feature: RT Description: RVT_N Location: 1667915-1668158 bp Feature: RT Description: RVT_N Location: 1 66791 5-1 6681 58 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1668203-1668851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 668203-1 668851 bp Feature: domain Description: GIIM Note: maturase Location: 1668905-1669136 bp Feature: domain Description: GIIM Note: maturase Location: 1 668905-1 6691 36 bp Feature: gene Location: 1669645-1669824 bp Feature: gene Location: 1670185-1670829 bp Feature: gene Location: 1691529-1691831 bp Feature: domain Description: PRK08644 Location: 1691562-1691826 bp Feature: domain Description: PRK08644 Location: 1 691 562-1 691 826 bp Feature: gene Location: 1691922-1692920 bp Feature: domain Description: TraG-D_C Location: 1692303-1692588 bp Feature: domain Description: TraG-D_C Location: 1 692303-1 692588 bp Feature: gene Location: 1692881-1694701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1693148-1693970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6931 48-1 693970 bp Feature: domain Description: Intron_maturas2 Location: 1694048-1694348 bp Feature: domain Description: Intron_maturas2 Location: 1 694048-1 694348 bp Feature: domain Description: HNHc Note: nucleases Location: 1694528-1694669 bp Feature: domain Description: HNHc Note: nucleases Location: 1 694528-1 694669 bp Feature: gene Location: 1695233-1695595 bp Feature: gene Location: 1695570-1697255 bp Feature: RT Description: RVT_N Location: 1695627-1695870 bp Feature: RT Description: RVT_N Location: 1 695627-1 695870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1695915-1696563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 69591 5-1 696563 bp Feature: domain Description: GIIM Note: maturase Location: 1696617-1696848 bp Feature: domain Description: GIIM Note: maturase Location: 1 69661 7-1 696848 bp Feature: gene Location: 1697888-1698811 bp Feature: domain Description: YWFCY Location: 1697894-1698071 bp Feature: domain Description: YWFCY Location: 1 697894-1 698071 bp Feature: gene Location: 1699121-1700305 bp Feature: domain Description: Relaxase Location: 1699241-1699628 bp Feature: domain Description: Relaxase Location: 1 699241 -1 699628 bp Feature: gene Location: 1703657-1704073 bp Feature: gene Location: 1704100-1704933 bp Feature: domain Description: Bac_Flav_CT_G Location: 1704103-1704916 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 7041 03-1 70491 6 bp Feature: gene Location: 1705546-1707222 bp Feature: RT Description: RVT_N Location: 1705603-1705846 bp Feature: RT Description: RVT_N Location: 1 705603-1 705846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705891-1706539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 705891 -1 706539 bp Feature: domain Description: GIIM Note: maturase Location: 1706590-1706824 bp Feature: domain Description: GIIM Note: maturase Location: 1 706590-1 706824 bp Feature: gene Location: 1707206-1709011 bp Feature: domain Description: Bac_Flav_CT_G Location: 1707320-1708994 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 707320-1 708994 bp Feature: gene Location: 1709066-1709275 bp Feature: gene Location: 1971508-1972137 bp Feature: domain Description: DUF4141 Location: 1971523-1971676 bp Feature: domain Description: DUF41 41 Location: 1 971 523-1 971 676 bp Feature: gene Location: 1972491-1974296 bp Feature: domain Description: Bac_Flav_CT_G Location: 1972605-1974279 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 972605-1 974279 bp Feature: gene Location: 1974280-1975956 bp Feature: RT Description: RVT_N Location: 1974337-1974580 bp Feature: RT Description: RVT_N Location: 1 974337-1 974580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974625-1975273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 974625-1 975273 bp Feature: domain Description: GIIM Note: maturase Location: 1975324-1975558 bp Feature: domain Description: GIIM Note: maturase Location: 1 975324-1 975558 bp Feature: gene Location: 1976569-1977402 bp Feature: domain Description: Bac_Flav_CT_G Location: 1976572-1977385 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 976572-1 977385 bp Feature: gene Location: 1977429-1977893 bp Feature: gene Location: 2818085-2820145 bp Feature: domain Description: PRK05218 Location: 2818097-2820140 bp Feature: domain Description: PRK0521 8 Location: 281 8097-28201 40 bp Feature: gene Location: 2820602-2820748 bp Feature: gene Location: 2821637-2823313 bp Feature: RT Description: RVT_N Location: 2821694-2821937 bp Feature: RT Description: RVT_N Location: 2821 694-2821 937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2821982-2822630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2821 982-2822630 bp Feature: domain Description: GIIM Note: maturase Location: 2822681-2822915 bp Feature: domain Description: GIIM Note: maturase Location: 2822681 -282291 5 bp Feature: gene Location: 2823736-2825643 bp Feature: domain Description: dnaK Location: 2823739-2825641 bp Feature: domain Description: dnaK Location: 2823739-2825641 bp Feature: gene Location: 2825951-2826859 bp Feature: domain Description: AbiF Location: 2825960-2826800 bp Feature: domain Description: AbiF Location: 2825960-2826800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_3 (pfam13612), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AbiF (COG4823), PRK08644 (sulfur carrier protein ThiS adenylyltransferase ThiF), TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), HNHc (smart00507), YWFCY (pfam14293)
Relaxase (pfam03432), Bac_Flav_CT_G (TIGR03783), DUF4141 (pfam13605), PRK05218 (heat shock protein 90; Provisional), dnaK (PRK00290)