myRT

myRT report for GCA_003033945.1_ASM303394v1

Download annotations/find similar RTs

Seq: CP028366.1 Paenibacillus glucanolyticus strain W10507 chromosome (6573405 bp)
Overview 1 RT 1: 5022537-5028971 bp 2 RT 2: 5398752-5404959 bp 3 RT 3: 6415112-6424758 bp Neighborhood of RT #1 [5022537, 5029000] SigX4 COG1233 COG1233 RVT-GII HNHc RNA_ligase PurR Neighborhood of RT #2 [5398752, 5404959] Uup RVT-GII HNHc Neighborhood of RT #3 [6415112, 6425396] RVT-GII HNHc RVT-GII Big_2 SLH SLH SLH Feature: gene Location: 5022537-5023337 bp Feature: domain Description: SigX4 Location: 5022540-5023329 bp Feature: domain Description: SigX4 Location: 5022540-5023329 bp Feature: gene Location: 5023375-5024763 bp Feature: domain Description: COG1233 Location: 5023441-5023801 bp Feature: domain Description: COG1 233 Location: 5023441 -5023801 bp Feature: domain Description: COG1233 Location: 5023987-5024695 bp Feature: domain Description: COG1 233 Location: 5023987-5024695 bp Feature: gene Location: 5025024-5026829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5025315-5026014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502531 5-502601 4 bp Feature: domain Description: HNHc Note: nucleases Location: 5026557-5026695 bp Feature: domain Description: HNHc Note: nucleases Location: 5026557-5026695 bp Feature: gene Location: 5027526-5027759 bp Feature: domain Description: RNA_ligase Location: 5027544-5027742 bp Feature: domain Description: RNA_ligase Location: 5027544-5027742 bp Feature: gene Location: 5027822-5029000 bp Feature: domain Description: PurR Location: 5028002-5028971 bp Feature: domain Description: PurR Location: 5028002-5028971 bp Feature: gene Location: 5398752-5400305 bp Feature: domain Description: Uup Location: 5398755-5400285 bp Feature: domain Description: Uup Location: 5398755-5400285 bp Feature: gene Location: 5400428-5401477 bp Feature: gene Location: 5401499-5403304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5401790-5402489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5401 790-5402489 bp Feature: domain Description: HNHc Note: nucleases Location: 5403032-5403170 bp Feature: domain Description: HNHc Note: nucleases Location: 5403032-54031 70 bp Feature: gene Location: 5404001-5404558 bp Feature: gene Location: 5404564-5404959 bp Feature: gene Location: 6415112-6415312 bp Feature: gene Location: 6415326-6416009 bp Feature: gene Location: 6416190-6417791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6416289-6416985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 641 6289-641 6985 bp Feature: domain Description: HNHc Note: nucleases Location: 6417540-6417678 bp Feature: domain Description: HNHc Note: nucleases Location: 641 7540-641 7678 bp Feature: gene Location: 6418814-6420571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6419072-6419768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 641 9072-641 9768 bp Feature: gene Location: 6421282-6424143 bp Feature: domain Description: Big_2 Location: 6422230-6422431 bp Feature: domain Description: Big_2 Location: 6422230-6422431 bp Feature: gene Location: 6424194-6425396 bp Feature: domain Description: SLH Location: 6424332-6424458 bp Feature: domain Description: SLH Location: 6424332-6424458 bp Feature: domain Description: SLH Location: 6424506-6424614 bp Feature: domain Description: SLH Location: 6424506-642461 4 bp Feature: domain Description: SLH Location: 6424644-6424758 bp Feature: domain Description: SLH Location: 6424644-6424758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SigX4 (TIGR02957), COG1233 (Phytoene dehydrogenase-related protein ), RVT-GII, HNHc (smart00507), RNA_ligase (pfam09414), PurR (COG1609), Uup (COG0488), Big_2 (pfam02368), SLH (pfam00395)