myRT

myRT report for GCA_003034145.1_ASM303414v1

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Seq: MULQ01000210.1 Burkholderia metallica strain A53 FCC5L5NANXX-wHAIPI019273-67_contig_212, whole genome shotgun sequence (9119 bp)
Overview 1 RT 1: 1-4407 bp Neighborhood of RT #1 [1, 4407] PRK06958 RVT-Retrons COG4928 Feature: gene Location: 1-135 bp Feature: domain Description: PRK06958 Location: 7-133 bp Feature: domain Description: PRK06958 Location: 7-1 33 bp Feature: gene Location: 175-1053 bp Feature: gene Location: 1139-1513 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1142-1265 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 42-1 265 bp Feature: gene Location: 1667-3520 bp Feature: domain Description: COG4928 Location: 1685-3506 bp Feature: domain Description: COG4928 Location: 1 685-3506 bp Feature: gene Location: 3520-4407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06958 (single-stranded DNA-binding protein; Provisional), RVT-Retrons, COG4928 (Predicted P-loop ATPase, KAP-like )

Seq: MULQ01000042.1 Burkholderia metallica strain A53 FCC5L5NANXX-wHAIPI019273-67_contig_42, whole genome shotgun sequence (168385 bp)
Overview 1 RT 1: 97422-100734 bp Neighborhood of RT #1 [97422, 100757] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 97422-98180 bp Feature: gene Location: 98177-98572 bp Feature: gene Location: 98583-99854 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 98952-99639 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 98952 -99639 bp Feature: gene Location: 99922-100278 bp Feature: domain Description: Avd_like Location: 99949-100255 bp Feature: domain Description: Avd_like Location: 99949-1002 55 bp Feature: gene Location: 100293-100757 bp Feature: domain Description: DUF1566 Location: 100554-100734 bp Feature: domain Description: DUF1566 Location: 100554-100734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: MULQ01000047.1 Burkholderia metallica strain A53 FCC5L5NANXX-wHAIPI019273-67_contig_47, whole genome shotgun sequence (133089 bp)
Overview 1 RT 1: 88550-94266 bp Neighborhood of RT #1 [88550, 94268] MFS_MucK Histone_HNS RVT-Retrons dTDP_HR_like_SDR_e DoxX Feature: gene Location: 88550-89785 bp Feature: domain Description: MFS_MucK Location: 88628-89762 bp Feature: domain Description: MFS_MucK Location: 88628-89762 bp Feature: gene Location: 90092-90421 bp Feature: domain Description: Histone_HNS Location: 90113-90350 bp Feature: domain Description: Histone_HNS Location: 90113 -903 50 bp Feature: gene Location: 90749-92209 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91328-91961 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 913 28-91961 bp Feature: gene Location: 92448-93689 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 92763-93654 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 92763 -93 654 bp Feature: gene Location: 93762-94268 bp Feature: domain Description: DoxX Location: 93891-94266 bp Feature: domain Description: DoxX Location: 93 891-94266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, dTDP_HR_like_SDR_e (cd05254), DoxX (pfam07681)