myRT

myRT report for GCA_003034395.1_ASM303439v1

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Seq: PHRH01000014.1 Klebsiella pneumoniae strain K9 KP-K9_NODE_14_length_156249_cov_48.3618, whole genome shotgun sequence (156249 bp)
Overview 1 RT 1: 1-4296 bp Neighborhood of RT #1 [1, 4296] RVT-Retrons AAA_15 Feature: gene Location: 1-717 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 181-712 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 81 -71 2 bp Feature: gene Location: 832-3078 bp Feature: domain Description: AAA_15 Location: 835-1843 bp Feature: domain Description: AAA_1 5 Location: 835-1 843 bp Feature: gene Location: 3991-4296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175)

Seq: PHRH01000002.1 Klebsiella pneumoniae strain K9 KP-K9_NODE_2_length_400519_cov_49.8583, whole genome shotgun sequence (400519 bp)
Overview 1 RT 1: 25643-29899 bp Neighborhood of RT #1 [25643, 29913] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25643-26080 bp Feature: domain Description: PRK10724 Location: 25646-26075 bp Feature: domain Description: PRK1072 4 Location: 2 5646-2 6075 bp Feature: gene Location: 26230-26712 bp Feature: domain Description: SmpB Location: 26260-26704 bp Feature: domain Description: SmpB Location: 2 62 60-2 6704 bp Feature: gene Location: 27327-27626 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27330-27441 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7330-2 7441 bp Feature: gene Location: 28069-28257 bp Feature: gene Location: 28813-29913 bp Feature: domain Description: D Location: 28819-29899 bp Feature: domain Description: D Location: 2 8819-2 9899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: PHRH01000048.1 Klebsiella pneumoniae strain K9 KP-K9_NODE_48_length_9754_cov_166.52, whole genome shotgun sequence (9754 bp)
Overview 1 RT 1: 1-3980 bp Neighborhood of RT #1 [1, 4045] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 1-963 bp Feature: domain Description: COG3547 Location: 40-952 bp Feature: domain Description: COG3 547 Location: 40-952 bp Feature: gene Location: 1212-1418 bp Feature: gene Location: 1505-3028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2510 bp Feature: domain Description: GIIM Note: maturase Location: 2585-2783 bp Feature: domain Description: GIIM Note: maturase Location: 2585-2783 bp Feature: gene Location: 2982-3407 bp Feature: gene Location: 3620-4045 bp Feature: domain Description: PHA02517 Location: 3644-3980 bp Feature: domain Description: PHA02517 Location: 3 644-3 980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PHRH01000072.1 Klebsiella pneumoniae strain K9 KP-K9_NODE_72_length_1894_cov_280.168, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 66-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII