myRT

myRT report for GCA_003034425.1_ASM303442v1

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Seq: PHRM01000010.1 Klebsiella pneumoniae strain K19 KP-K19_NODE_10_length_229652_cov_65.5589, whole genome shotgun sequence (229423 bp)
Overview 1 RT 1: 124662-131763 bp Neighborhood of RT #1 [124662, 131763] HTH_23 Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 124662-125138 bp Feature: domain Description: HTH_23 Location: 124740-124881 bp Feature: domain Description: HTH_23 Location: 1 24740-1 24881 bp Feature: gene Location: 125559-126428 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 126081-126252 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 26081 -1 26252 bp Feature: gene Location: 127084-128184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127264-127798 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 27264-1 27798 bp Feature: gene Location: 128299-130575 bp Feature: domain Description: AAA_15 Location: 128332-129340 bp Feature: domain Description: AAA_1 5 Location: 1 28332-1 29340 bp Feature: gene Location: 131458-131763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: PHRM01000002.1 Klebsiella pneumoniae strain K19 KP-K19_NODE_2_length_400519_cov_71.2806, whole genome shotgun sequence (400519 bp)
Overview 1 RT 1: 25643-29899 bp Neighborhood of RT #1 [25643, 29913] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25643-26080 bp Feature: domain Description: PRK10724 Location: 25646-26075 bp Feature: domain Description: PRK1072 4 Location: 2 5646-2 6075 bp Feature: gene Location: 26230-26712 bp Feature: domain Description: SmpB Location: 26260-26704 bp Feature: domain Description: SmpB Location: 2 62 60-2 6704 bp Feature: gene Location: 27327-27626 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27330-27441 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7330-2 7441 bp Feature: gene Location: 28069-28257 bp Feature: gene Location: 28813-29913 bp Feature: domain Description: D Location: 28819-29899 bp Feature: domain Description: D Location: 2 8819-2 9899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: PHRM01000048.1 Klebsiella pneumoniae strain K19 KP-K19_NODE_48_length_10677_cov_130.687, whole genome shotgun sequence (10677 bp)
Overview 1 RT 1: 777-4870 bp Neighborhood of RT #1 [777, 4935] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 777-1853 bp Feature: domain Description: COG3547 Location: 816-1737 bp Feature: domain Description: COG3 547 Location: 816-173 7 bp Feature: gene Location: 2102-2308 bp Feature: gene Location: 2395-3918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2668-3400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2668-3 400 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3673 bp Feature: domain Description: GIIM Note: maturase Location: 3 475-3 673 bp Feature: gene Location: 3872-4297 bp Feature: gene Location: 4510-4935 bp Feature: domain Description: PHA02517 Location: 4534-4870 bp Feature: domain Description: PHA02517 Location: 453 4-4870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PHRM01000083.1 Klebsiella pneumoniae strain K19 KP-K19_NODE_83_length_1894_cov_261.228, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 66-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII