myRT

myRT report for GCA_003034445.1_ASM303444v1

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Seq: PHRI01000012.1 Klebsiella pneumoniae strain K5 KP-K5_NODE_12_length_183799_cov_54.0118_ID_1372, whole genome shotgun sequence (183799 bp)
Overview 1 RT 1: 98416-104868 bp Neighborhood of RT #1 [98416, 104868] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 98416-98721 bp Feature: gene Location: 99604-101880 bp Feature: domain Description: AAA_15 Location: 99637-100645 bp Feature: domain Description: AAA_1 5 Location: 99637-1 00645 bp Feature: gene Location: 101995-103095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102175-102709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 021 75-1 02709 bp Feature: gene Location: 103751-104587 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 104240-104411 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 04240-1 0441 1 bp Feature: gene Location: 104617-104868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: PHRI01000027.1 Klebsiella pneumoniae strain K5 KP-K5_NODE_27_length_65959_cov_64.9852_ID_2488, whole genome shotgun sequence (65959 bp)
Overview 1 RT 1: 37269-40343 bp Neighborhood of RT #1 [37269, 40348] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 37269-37487 bp Feature: domain Description: PRK09678 Location: 37272-37470 bp Feature: domain Description: PRK09678 Location: 372 72 -37470 bp Feature: gene Location: 37734-37922 bp Feature: gene Location: 37891-38664 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 38026-38479 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3802 6-38479 bp Feature: gene Location: 39279-39761 bp Feature: domain Description: SmpB Location: 39309-39753 bp Feature: domain Description: SmpB Location: 39309-39753 bp Feature: gene Location: 39872-40348 bp Feature: domain Description: PRK10724 Location: 39878-40343 bp Feature: domain Description: PRK1072 4 Location: 39878-40343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: PHRI01000049.1 Klebsiella pneumoniae strain K5 KP-K5_NODE_49_length_10644_cov_121.965_ID_4450, whole genome shotgun sequence (10644 bp)
Overview 1 RT 1: 5381-9752 bp Neighborhood of RT #1 [5381, 9868] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5381-5683 bp Feature: domain Description: InsE Location: 5390-5672 bp Feature: domain Description: InsE Location: 53 90-5672 bp Feature: gene Location: 5710-6135 bp Feature: domain Description: PHA02517 Location: 5734-6070 bp Feature: domain Description: PHA02517 Location: 573 4-6070 bp Feature: gene Location: 6727-8250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7000-7732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7000-773 2 bp Feature: domain Description: GIIM Note: maturase Location: 7807-8005 bp Feature: domain Description: GIIM Note: maturase Location: 7807-8005 bp Feature: gene Location: 8415-8573 bp Feature: domain Description: PHA02517 Location: 8418-8538 bp Feature: domain Description: PHA02517 Location: 8418-853 8 bp Feature: gene Location: 8792-9868 bp Feature: domain Description: COG3547 Location: 8831-9752 bp Feature: domain Description: COG3 547 Location: 883 1-9752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: PHRI01000072.1 Klebsiella pneumoniae strain K5 KP-K5_NODE_72_length_1894_cov_277.079_ID_7980, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 66-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII