myRT

myRT report for GCA_003034525.1_ASM303452v1

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Seq: PHRO01000018.1 Klebsiella pneumoniae strain K13 KP-K13_NODE_18_length_101874_cov_38.7856_ID_1844, whole genome shotgun sequence (101874 bp)
Overview 1 RT 1: 97661-101867 bp Neighborhood of RT #1 [97661, 101872] AAA_15 RVT-Retrons Feature: gene Location: 97661-97966 bp Feature: gene Location: 98849-101125 bp Feature: domain Description: AAA_15 Location: 98882-99890 bp Feature: domain Description: AAA_1 5 Location: 98882-99890 bp Feature: gene Location: 101240-101872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101420-101867 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 420-1 01 867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: PHRO01000031.1 Klebsiella pneumoniae strain K13 KP-K13_NODE_31_length_42235_cov_43.8287_ID_2846, whole genome shotgun sequence (42235 bp)
Overview 1 RT 1: 13545-16619 bp Neighborhood of RT #1 [13545, 16624] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 13545-13763 bp Feature: domain Description: PRK09678 Location: 13548-13746 bp Feature: domain Description: PRK09678 Location: 13548-13746 bp Feature: gene Location: 14010-14198 bp Feature: gene Location: 14167-14940 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14302-14755 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14302 -14755 bp Feature: gene Location: 15555-16037 bp Feature: domain Description: SmpB Location: 15585-16029 bp Feature: domain Description: SmpB Location: 15585-1602 9 bp Feature: gene Location: 16148-16624 bp Feature: domain Description: PRK10724 Location: 16154-16619 bp Feature: domain Description: PRK1072 4 Location: 16154-16619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: PHRO01000055.1 Klebsiella pneumoniae strain K13 KP-K13_NODE_55_length_10669_cov_92.162_ID_4761, whole genome shotgun sequence (10669 bp)
Overview 1 RT 1: 5406-9777 bp Neighborhood of RT #1 [5406, 9893] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5406-5708 bp Feature: domain Description: InsE Location: 5415-5697 bp Feature: domain Description: InsE Location: 5415-5697 bp Feature: gene Location: 5735-6160 bp Feature: domain Description: PHA02517 Location: 5759-6095 bp Feature: domain Description: PHA02517 Location: 5759-6095 bp Feature: gene Location: 6752-8275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7025-7757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7025-7757 bp Feature: domain Description: GIIM Note: maturase Location: 7832-8030 bp Feature: domain Description: GIIM Note: maturase Location: 783 2-803 0 bp Feature: gene Location: 8440-8598 bp Feature: domain Description: PHA02517 Location: 8443-8563 bp Feature: domain Description: PHA02517 Location: 8443 -8563 bp Feature: gene Location: 8817-9893 bp Feature: domain Description: COG3547 Location: 8856-9777 bp Feature: domain Description: COG3 547 Location: 8856-9777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: PHRO01000081.1 Klebsiella pneumoniae strain K13 KP-K13_NODE_81_length_1894_cov_196.892_ID_9363, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII