myRT

myRT report for GCA_003034545.1_ASM303454v1

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Seq: PHRP01000002.1 Klebsiella pneumoniae strain K10 KP-K10_NODE_2_length_400367_cov_48.214_ID_827, whole genome shotgun sequence (400367 bp)
Overview 1 RT 1: 25643-29899 bp Neighborhood of RT #1 [25643, 29913] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25643-26080 bp Feature: domain Description: PRK10724 Location: 25646-26075 bp Feature: domain Description: PRK1 0724 Location: 25646-26075 bp Feature: gene Location: 26230-26712 bp Feature: domain Description: SmpB Location: 26260-26704 bp Feature: domain Description: SmpB Location: 26260-26704 bp Feature: gene Location: 27327-27626 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27330-27441 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27330-27441 bp Feature: gene Location: 28069-28257 bp Feature: gene Location: 28813-29913 bp Feature: domain Description: D Location: 28819-29899 bp Feature: domain Description: D Location: 2881 9-29899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: PHRP01000048.1 Klebsiella pneumoniae strain K10 KP-K10_NODE_48_length_11424_cov_115.882_ID_7874, whole genome shotgun sequence (11424 bp)
Overview 1 RT 1: 6161-10532 bp Neighborhood of RT #1 [6161, 10648] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 6161-6463 bp Feature: domain Description: InsE Location: 6170-6452 bp Feature: domain Description: InsE Location: 6170-6452 bp Feature: gene Location: 6490-6915 bp Feature: domain Description: PHA02517 Location: 6514-6850 bp Feature: domain Description: PHA02 517 Location: 6514-6850 bp Feature: gene Location: 7507-9030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7780-8512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7780-8512 bp Feature: domain Description: GIIM Note: maturase Location: 8587-8785 bp Feature: domain Description: GIIM Note: maturase Location: 8587-8785 bp Feature: gene Location: 9195-9353 bp Feature: domain Description: PHA02517 Location: 9198-9318 bp Feature: domain Description: PHA02 517 Location: 9198-9318 bp Feature: gene Location: 9572-10648 bp Feature: domain Description: COG3547 Location: 9611-10532 bp Feature: domain Description: COG3547 Location: 9611-10532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: PHRP01000066.1 Klebsiella pneumoniae strain K10 KP-K10_NODE_66_length_3186_cov_2.54953_ID_6027, whole genome shotgun sequence (3186 bp)
Overview 1 RT 1: 312-3087 bp Neighborhood of RT #1 [312, 3185] AAA_15 RVT-Retrons Feature: gene Location: 312-2588 bp Feature: domain Description: AAA_15 Location: 345-1353 bp Feature: domain Description: AAA_15 Location: 3 45-13 53 bp Feature: gene Location: 2703-3185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2883-3087 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2883 -3 087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: PHRP01000071.1 Klebsiella pneumoniae strain K10 KP-K10_NODE_71_length_1894_cov_159.741_ID_8635, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII