myRT

myRT report for GCA_003037865.1_ASM303786v1

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Seq: PWBI01000023.1 Klebsiella pneumoniae strain WCHKP040027 NODE_23_length_77286_cov_67.437496, whole genome shotgun sequence (77286 bp)
Overview 1 RT 1: 72848-77134 bp Neighborhood of RT #1 [72848, 77283] AAA_15 RVT-Retrons Feature: gene Location: 72848-73153 bp Feature: gene Location: 74032-76308 bp Feature: domain Description: AAA_15 Location: 74065-75073 bp Feature: domain Description: AAA_1 5 Location: 74065-75073 bp Feature: gene Location: 76423-77283 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76606-77134 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76606-771 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: PWBI01000035.1 Klebsiella pneumoniae strain WCHKP040027 NODE_35_length_54787_cov_98.175633, whole genome shotgun sequence (54787 bp)
Overview 1 RT 1: 43776-47379 bp Neighborhood of RT #1 [43776, 47504] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 43776-44033 bp Feature: gene Location: 44064-44339 bp Feature: gene Location: 44913-46580 bp Feature: RT Description: RVT_N Location: 44961-45198 bp Feature: RT Description: RVT_N Location: 44961-45198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45249-45891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 49-45891 bp Feature: domain Description: GIIM Note: maturase Location: 45942-46176 bp Feature: domain Description: GIIM Note: maturase Location: 45942 -46176 bp Feature: domain Description: HNHc Note: nucleases Location: 46386-46545 bp Feature: domain Description: HNHc Note: nucleases Location: 46386-46545 bp Feature: gene Location: 46894-47085 bp Feature: gene Location: 47082-47504 bp Feature: domain Description: DUF1380 Location: 47085-47379 bp Feature: domain Description: DUF1380 Location: 47085-47379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: PWBI01000088.1 Klebsiella pneumoniae strain WCHKP040027 NODE_88_length_1892_cov_764.198550, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII