myRT

myRT report for GCA_003043945.1_ASM304394v1

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Seq: PYXG01000001.1 Prevotella sp. oral taxon 376 strain F0043 scf7180000000008, whole genome shotgun sequence (2065867 bp)
Overview 1 RT 1: 547182-555177 bp 2 RT 2: 1328529-1337196 bp 3 RT 3: 1631527-1636911 bp Neighborhood of RT #1 [547182, 555177] N6_Mtase COG4646 RVT_N RVT-GII GIIM Neighborhood of RT #2 [1328529, 1337321] N6_Mtase COG4646 RVT_N RVT-GII GIIM DDE_Tnp_1_3 Neighborhood of RT #3 [1631527, 1637087] RVT_N RVT-GII GIIM AbiEii Feature: gene Location: 547182-551333 bp Feature: domain Description: N6_Mtase Location: 547224-547581 bp Feature: domain Description: N6_Mtase Location: 547224-547581 bp Feature: domain Description: COG4646 Location: 548667-550950 bp Feature: domain Description: COG4646 Location: 548667-550950 bp Feature: gene Location: 551405-551572 bp Feature: gene Location: 551986-553662 bp Feature: RT Description: RVT_N Location: 552046-552289 bp Feature: RT Description: RVT_N Location: 552046-552289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552334-552982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552334-552982 bp Feature: domain Description: GIIM Note: maturase Location: 553036-553267 bp Feature: domain Description: GIIM Note: maturase Location: 553036-553267 bp Feature: gene Location: 553664-554929 bp Feature: gene Location: 555016-555177 bp Feature: gene Location: 1328529-1332845 bp Feature: domain Description: N6_Mtase Location: 1328835-1329465 bp Feature: domain Description: N6_Mtase Location: 1 328835-1 329465 bp Feature: domain Description: COG4646 Location: 1330206-1332462 bp Feature: domain Description: COG4646 Location: 1 330206-1 332462 bp Feature: gene Location: 1332917-1333084 bp Feature: gene Location: 1333498-1335174 bp Feature: RT Description: RVT_N Location: 1333558-1333801 bp Feature: RT Description: RVT_N Location: 1 333558-1 333801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1333846-1334494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 333846-1 334494 bp Feature: domain Description: GIIM Note: maturase Location: 1334548-1334779 bp Feature: domain Description: GIIM Note: maturase Location: 1 334548-1 334779 bp Feature: gene Location: 1335176-1336321 bp Feature: gene Location: 1336386-1337321 bp Feature: domain Description: DDE_Tnp_1_3 Location: 1336731-1337196 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 1 336731 -1 3371 96 bp Feature: gene Location: 1631527-1631964 bp Feature: gene Location: 1632036-1632203 bp Feature: gene Location: 1632617-1634293 bp Feature: RT Description: RVT_N Location: 1632677-1632920 bp Feature: RT Description: RVT_N Location: 1 632677-1 632920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1632965-1633613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 632965-1 63361 3 bp Feature: domain Description: GIIM Note: maturase Location: 1633667-1633898 bp Feature: domain Description: GIIM Note: maturase Location: 1 633667-1 633898 bp Feature: gene Location: 1634295-1635470 bp Feature: gene Location: 1636176-1637087 bp Feature: domain Description: AbiEii Location: 1636215-1636911 bp Feature: domain Description: AbiEii Location: 1 63621 5-1 63691 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_3 (pfam13612), AbiEii (pfam08843)