myRT

myRT report for GCA_003046315.1_ASM304631v1

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Seq: PZZP01000001.1 Desmospora activa DSM 45169 Ga0192300_101, whole genome shotgun sequence (2754541 bp)
Overview 1 RT 1: 986894-995446 bp 2 RT 2: 1367873-1375810 bp Neighborhood of RT #1 [986894, 995502] HEAT_2 HEAT_2 HEAT_2 RVT-Retrons aroK COG3333 Neighborhood of RT #2 [1367873, 1375810] SpoIIM Phage_int_SAM_1 INT_Cre_C RVT-Retrons Feature: gene Location: 986894-989788 bp Feature: domain Description: HEAT_2 Location: 987956-988184 bp Feature: domain Description: HEAT_2 Location: 987956-9881 84 bp Feature: domain Description: HEAT_2 Location: 988232-988385 bp Feature: domain Description: HEAT_2 Location: 988232-988385 bp Feature: domain Description: HEAT_2 Location: 989144-989306 bp Feature: domain Description: HEAT_2 Location: 9891 44-989306 bp Feature: gene Location: 989793-991442 bp Feature: gene Location: 991471-992934 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 992044-992662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 992044-992662 bp Feature: gene Location: 993225-993818 bp Feature: domain Description: aroK Location: 993282-993792 bp Feature: domain Description: aroK Location: 993282-993792 bp Feature: gene Location: 993973-995502 bp Feature: domain Description: COG3333 Location: 994030-995446 bp Feature: domain Description: COG3333 Location: 994030-995446 bp Feature: gene Location: 1367873-1368880 bp Feature: domain Description: SpoIIM Location: 1368206-1368788 bp Feature: domain Description: SpoIIM Location: 1 368206-1 368788 bp Feature: gene Location: 1368987-1369949 bp Feature: domain Description: Phage_int_SAM_1 Location: 1369032-1369263 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 369032-1 369263 bp Feature: domain Description: INT_Cre_C Location: 1369389-1369941 bp Feature: domain Description: INT_Cre_C Location: 1 369389-1 369941 bp Feature: gene Location: 1370101-1371570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1370677-1371295 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 370677-1 371 295 bp Feature: gene Location: 1371584-1373224 bp Feature: gene Location: 1373249-1375810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-Retrons, aroK (PRK05057), COG3333 (TctA family transporter ), SpoIIM (pfam01944), Phage_int_SAM_1 (pfam02899), INT_Cre_C (cd00799)

Seq: PZZP01000002.1 Desmospora activa DSM 45169 Ga0192300_102, whole genome shotgun sequence (569576 bp)
Overview 1 RT 1: 509020-513725 bp Neighborhood of RT #1 [509020, 513730] nucleoid_noc BcsQ RVT-GII Intron_maturas2 nucleoid_noc Feature: gene Location: 509020-509880 bp Feature: domain Description: nucleoid_noc Location: 509095-509707 bp Feature: domain Description: nucleoid_noc Location: 509095-509707 bp Feature: gene Location: 509870-510745 bp Feature: domain Description: BcsQ Location: 510029-510737 bp Feature: domain Description: BcsQ Location: 51002 9-510737 bp Feature: gene Location: 510843-512303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511116-511818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511116-511818 bp Feature: domain Description: Intron_maturas2 Location: 511914-512256 bp Feature: domain Description: Intron_maturas2 Location: 511914-512 2 56 bp Feature: gene Location: 512387-512557 bp Feature: gene Location: 512909-513730 bp Feature: domain Description: nucleoid_noc Location: 512972-513725 bp Feature: domain Description: nucleoid_noc Location: 512 972 -51372 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nucleoid_noc (TIGR04285), BcsQ (COG1192), RVT-GII, Intron_maturas2 (pfam01348)