myRT

myRT report for GCA_003046465.1_ASM304646v1

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Seq: PZQR01000131.1 Bacillus thuringiensis strain Bt-ICA/UNMSM10RA scaffold_130, whole genome shotgun sequence (6569 bp)
Overview 1 RT 1: 740-5097 bp Neighborhood of RT #1 [740, 5162] RVT-GII HNHc OYE_like_FMN GltS_FMN Feature: gene Location: 740-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1 694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: gene Location: 2561-3520 bp Feature: domain Description: OYE_like_FMN Location: 2612-3491 bp Feature: domain Description: OYE_like_FMN Location: 261 2-3491 bp Feature: gene Location: 3588-5162 bp Feature: domain Description: GltS_FMN Location: 3735-5097 bp Feature: domain Description: GltS_FMN Location: 3735-5097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OYE_like_FMN (cd02933), GltS_FMN (cd02808), RVT-GII, HNHc (smart00507)

Seq: PZQR01000058.1 Bacillus thuringiensis strain Bt-ICA/UNMSM10RA scaffold_57, whole genome shotgun sequence (23610 bp)
Overview 1 RT 1: 21320-23379 bp Neighborhood of RT #1 [21320, 23462] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 21320-21565 bp Feature: gene Location: 21645-22121 bp Feature: domain Description: DDE_Tnp_1 Location: 21651-22080 bp Feature: domain Description: DDE_Tnp_1 Location: 2 1651-2 2 080 bp Feature: gene Location: 22131-23462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22440-23079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 440-2 3079 bp Feature: domain Description: GIIM Note: maturase Location: 23154-23379 bp Feature: domain Description: GIIM Note: maturase Location: 2 3154-2 3379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: PZQR01000087.1 Bacillus thuringiensis strain Bt-ICA/UNMSM10RA scaffold_86, whole genome shotgun sequence (13062 bp)
Overview 1 RT 1: 5668-10004 bp Neighborhood of RT #1 [5668, 10006] Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 5668-5802 bp Feature: gene Location: 6023-6604 bp Feature: domain Description: Lysozyme_like Location: 6158-6593 bp Feature: domain Description: Lysozyme_like Location: 6158-6593 bp Feature: gene Location: 7180-9003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7444-8278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7444-8278 bp Feature: domain Description: Intron_maturas2 Location: 8347-8686 bp Feature: domain Description: Intron_maturas2 Location: 83 47-8686 bp Feature: domain Description: HNHc Note: nucleases Location: 8824-8980 bp Feature: domain Description: HNHc Note: nucleases Location: 8824-8980 bp Feature: gene Location: 9005-9136 bp Feature: gene Location: 9500-10006 bp Feature: domain Description: RimL Location: 9509-10004 bp Feature: domain Description: RimL Location: 9509-10004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670)