myRT

myRT report for GCA_003048005.1_ASM304800v1

Download annotations/find similar RTs

Seq: QAGC01000080.1 Escherichia coli strain KG-18 NODE_21_length_66273_cov_7.8036_ID_41, whole genome shotgun sequence (66273 bp)
Overview 1 RT 1: 7032-11252 bp Neighborhood of RT #1 [7032, 11252] RVT-UG7 PRK09692 Feature: gene Location: 7032-7172 bp Feature: gene Location: 7282-8022 bp Feature: gene Location: 8019-9647 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 8427-8856 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 8427-8856 bp Feature: gene Location: 9640-10824 bp Feature: domain Description: PRK09692 Location: 9646-10801 bp Feature: domain Description: PRK09692 Location: 9646-1 0801 bp Feature: gene Location: 11100-11252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional)

Seq: QAGC01000055.1 Escherichia coli strain KG-18 NODE_32_length_27270_cov_6.57256_ID_63, whole genome shotgun sequence (27270 bp)
Overview 1 RT 1: 2-2725 bp Neighborhood of RT #1 [2, 2790] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2-127 bp Feature: domain Description: PHA02517 Location: 5-116 bp Feature: domain Description: PHA02 517 Location: 5-116 bp Feature: gene Location: 250-1773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 3-12 55 bp Feature: domain Description: GIIM Note: maturase Location: 1330-1528 bp Feature: domain Description: GIIM Note: maturase Location: 1330-152 8 bp Feature: gene Location: 1727-2152 bp Feature: gene Location: 2365-2790 bp Feature: domain Description: PHA02517 Location: 2389-2725 bp Feature: domain Description: PHA02 517 Location: 2 389-2 72 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)