myRT

myRT report for GCA_003048305.1_ASM304830v1

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Seq: PYGS01000142.1 Enterococcus mundtii strain K7-EM NODE_142_length_4068_cov_4.889876, whole genome shotgun sequence (4068 bp)
Overview 1 RT 1: 36-3753 bp Neighborhood of RT #1 [36, 4067] RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD YbjD Feature: gene Location: 36-350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66-318 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66-31 8 bp Feature: gene Location: 712-2628 bp Feature: domain Description: DEXQc_UvrD Location: 751-1075 bp Feature: domain Description: DEXQc_UvrD Location: 751 -1 075 bp Feature: domain Description: DEXQc_UvrD Location: 1111-1378 bp Feature: domain Description: DEXQc_UvrD Location: 1 1 1 1 -1 378 bp Feature: domain Description: UvrD Location: 2344-2563 bp Feature: domain Description: UvrD Location: 2344-2563 bp Feature: gene Location: 2610-4067 bp Feature: domain Description: YbjD Location: 2883-3753 bp Feature: domain Description: YbjD Location: 2883-3753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), RVT-Retrons, DEXQc_UvrD (cd17932), UvrD (COG0210)

Seq: PYGS01000027.1 Enterococcus mundtii strain K7-EM NODE_27_length_34539_cov_32.374695, whole genome shotgun sequence (34539 bp)
Overview 1 RT 1: 17613-21426 bp Neighborhood of RT #1 [17613, 21431] RadC RVT-GII RVT-GII HNHc RadC CspC Feature: gene Location: 17613-18164 bp Feature: domain Description: RadC Location: 17634-18147 bp Feature: domain Description: RadC Location: 17634-18147 bp Feature: gene Location: 18255-18470 bp Feature: gene Location: 18901-19398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19198-19390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19198-19390 bp Feature: gene Location: 19471-20820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19480-19939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19480-19939 bp Feature: domain Description: HNHc Note: nucleases Location: 20524-20671 bp Feature: domain Description: HNHc Note: nucleases Location: 2 052 4-2 0671 bp Feature: gene Location: 20878-21081 bp Feature: domain Description: RadC Location: 20929-21067 bp Feature: domain Description: RadC Location: 2 092 9-2 1067 bp Feature: gene Location: 21231-21431 bp Feature: domain Description: CspC Location: 21234-21426 bp Feature: domain Description: CspC Location: 2 12 34-2 142 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, HNHc (smart00507), CspC (COG1278)