myRT

myRT report for GCA_003049135.1_ASM304913v1

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Seq: PYPT01000128.1 Mycobacterium tuberculosis strain AUH5 NODE_128_length_4808_cov_0.814767, whole genome shotgun sequence (4808 bp)
Overview 1 RT 1: 1094-4702 bp Neighborhood of RT #1 [1094, 4749] L1-EN RT_nLTR_like RVT-GII DUF1725 Feature: gene Location: 1094-2053 bp Feature: domain Description: L1-EN Location: 1124-1631 bp Feature: domain Description: L1 -EN Location: 1 1 24-1 631 bp Feature: gene Location: 2206-2571 bp Feature: domain Description: RT_nLTR_like Location: 2458-2569 bp Feature: domain Description: RT_nLTR_like Location: 2458-2569 bp Feature: gene Location: 2611-4749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2650-3163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2650-31 63 bp Feature: domain Description: DUF1725 Location: 4648-4702 bp Feature: domain Description: DUF1 725 Location: 4648-4702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RT_nLTR_like (cd01650), RVT-GII, DUF1725 (pfam08333)

Seq: PYPT01001674.1 Mycobacterium tuberculosis strain AUH5 NODE_1702_length_387_cov_0.811538, whole genome shotgun sequence (387 bp)
Overview 1 RT 1: 1-175 bp Neighborhood of RT #1 [1, 183] RVT-GII Feature: gene Location: 1-183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 -175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYPT01000030.1 Mycobacterium tuberculosis strain AUH5 NODE_30_length_46544_cov_11.6617, whole genome shotgun sequence (46544 bp)
Overview 1 RT 1: 19474-24530 bp Neighborhood of RT #1 [19474, 24550] LolD CAP_ED LolE SalY RVT-GII PRK13034 Feature: gene Location: 19474-20466 bp Feature: domain Description: LolD Location: 19489-20122 bp Feature: domain Description: LolD Location: 19489-20122 bp Feature: domain Description: CAP_ED Location: 20155-20413 bp Feature: domain Description: CAP_ED Location: 20155-20413 bp Feature: gene Location: 20469-21518 bp Feature: domain Description: LolE Location: 20475-20808 bp Feature: domain Description: LolE Location: 20475-20808 bp Feature: domain Description: SalY Location: 21090-21507 bp Feature: domain Description: SalY Location: 21090-21507 bp Feature: gene Location: 21949-22683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22189-22501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22189-22501 bp Feature: gene Location: 23049-23198 bp Feature: gene Location: 23273-24550 bp Feature: domain Description: PRK13034 Location: 23285-24530 bp Feature: domain Description: PRK13 03 4 Location: 23 285-2453 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), CAP_ED (cl00047), LolE (COG4591), SalY (COG0577), RVT-GII, PRK13034 (serine hydroxymethyltransferase; Reviewed)

Seq: PYPT01000347.1 Mycobacterium tuberculosis strain AUH5 NODE_347_length_770_cov_0.958009, whole genome shotgun sequence (770 bp)
Overview 1 RT 1: 1-580 bp Neighborhood of RT #1 [1, 768] RVT-GII Feature: gene Location: 1-768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII