myRT

myRT report for GCA_003049345.1_ASM304934v1

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Seq: PYQC01000120.1 Mycobacterium tuberculosis strain AUH16 NODE_120_length_5375_cov_1.34203, whole genome shotgun sequence (5375 bp)
Overview 1 RT 1: 357-5154 bp Neighborhood of RT #1 [357, 5154] Tnp_22_trimer Transposase_22 L1-EN RVT-GII Feature: gene Location: 357-998 bp Feature: domain Description: Tnp_22_trimer Location: 471-597 bp Feature: domain Description: Tnp_22_trimer Location: 471 -597 bp Feature: domain Description: Transposase_22 Location: 606-897 bp Feature: domain Description: Transposase_22 Location: 606-897 bp Feature: gene Location: 1220-2542 bp Feature: domain Description: L1-EN Location: 1250-1931 bp Feature: domain Description: L1 -EN Location: 1 250-1 931 bp Feature: gene Location: 2824-3939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2839-3460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2839-3460 bp Feature: gene Location: 3912-4547 bp Feature: gene Location: 4954-5154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994)

Seq: PYQC01000056.1 Mycobacterium tuberculosis strain AUH16 NODE_56_length_31090_cov_24.5495, whole genome shotgun sequence (31090 bp)
Overview 1 RT 1: 22019-27042 bp Neighborhood of RT #1 [22019, 27095] PRK13034 RVT-GII LolE SalY LolD CAP_ED Feature: gene Location: 22019-23296 bp Feature: domain Description: PRK13034 Location: 22031-23276 bp Feature: domain Description: PRK13034 Location: 2 2 031-2 32 76 bp Feature: gene Location: 23371-23520 bp Feature: gene Location: 23886-24620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24126-24438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 412 6-2 4438 bp Feature: gene Location: 25051-26100 bp Feature: domain Description: LolE Location: 25057-25390 bp Feature: domain Description: LolE Location: 2 5057-2 5390 bp Feature: domain Description: SalY Location: 25672-26089 bp Feature: domain Description: SalY Location: 2 5672 -2 6089 bp Feature: gene Location: 26103-27095 bp Feature: domain Description: LolD Location: 26118-26751 bp Feature: domain Description: LolD Location: 2 6118-2 6751 bp Feature: domain Description: CAP_ED Location: 26784-27042 bp Feature: domain Description: CAP_ED Location: 2 6784-2 7042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13034 (serine hydroxymethyltransferase; Reviewed), RVT-GII, LolE (COG4591), SalY (COG0577), LolD (COG1136), CAP_ED (cl00047)