myRT

myRT report for GCA_003049615.1_ASM304961v1

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Seq: PYWJ01000103.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_104_length_1111_cov_618.392_ID_207, whole genome shotgun sequence (1111 bp)
Overview 1 RT 1: 539-1109 bp Neighborhood of RT #1 [539, 1108] RVT-GII Feature: gene Location: 539-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 704-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 704-1 1 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWJ01000108.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_111_length_749_cov_604.437_ID_221, whole genome shotgun sequence (749 bp)
Overview 1 RT 1: 77-557 bp Neighborhood of RT #1 [77, 748] RVT-GII GIIM Feature: gene Location: 77-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80-2 90 bp Feature: domain Description: GIIM Note: maturase Location: 350-557 bp Feature: domain Description: GIIM Note: maturase Location: 350-557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PYWJ01000150.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_169_length_413_cov_1.52098_ID_337, whole genome shotgun sequence (413 bp)
Overview 1 RT 1: 3-372 bp Neighborhood of RT #1 [3, 410] RVT-GII Feature: gene Location: 3-410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-3 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWJ01000154.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_175_length_406_cov_0.967742_ID_349, whole genome shotgun sequence (406 bp)
Overview 1 RT 1: 2-389 bp Neighborhood of RT #1 [2, 403] RVT-UNC Feature: gene Location: 2-403 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 68-389 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 68-389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3/RVT-CRISPR/RVT-GII/RVT-DGRs(RVT-UNC)

Seq: PYWJ01000213.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_248_length_252_cov_129.288_ID_495, whole genome shotgun sequence (252 bp)
Overview 1 RT 1: 111-237 bp Neighborhood of RT #1 [111, 251] RVT-GII Feature: gene Location: 111-251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWJ01000215.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_250_length_247_cov_383.733_ID_499, whole genome shotgun sequence (247 bp)
Overview 1 RT 1: 1-244 bp Neighborhood of RT #1 [1, 246] RVT-GII Feature: gene Location: 1-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWJ01000041.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_41_length_24185_cov_115.218_ID_81, whole genome shotgun sequence (24185 bp)
Overview 1 RT 1: 10510-16023 bp Neighborhood of RT #1 [10510, 16097] E1_enzyme_family Prok-JAB RVT-GII Intron_maturas2 HNHc Prok-E2_D Feature: gene Location: 10510-11421 bp Feature: domain Description: E1_enzyme_family Location: 10618-11038 bp Feature: domain Description: E1_enzyme_family Location: 10618-11038 bp Feature: gene Location: 11440-11730 bp Feature: domain Description: Prok-JAB Location: 11449-11581 bp Feature: domain Description: Prok-JAB Location: 11449-11581 bp Feature: gene Location: 11939-13771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12203-13028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12203-13028 bp Feature: domain Description: Intron_maturas2 Location: 13115-13421 bp Feature: domain Description: Intron_maturas2 Location: 13115-13421 bp Feature: domain Description: HNHc Note: nucleases Location: 13556-13721 bp Feature: domain Description: HNHc Note: nucleases Location: 13556-137 21 bp Feature: gene Location: 14319-15251 bp Feature: gene Location: 15330-16097 bp Feature: domain Description: Prok-E2_D Location: 15735-16023 bp Feature: domain Description: Prok-E2_D Location: 157 35-16023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT E1_enzyme_family (cl22428), Prok-JAB (pfam14464), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Prok-E2_D (pfam14460)

Seq: PYWJ01000048.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_48_length_19400_cov_129.13_ID_95, whole genome shotgun sequence (19400 bp)
Overview 1 RT 1: 8751-15901 bp Neighborhood of RT #1 [8751, 15901] CzcD RVT-GII SufI Feature: gene Location: 8751-9698 bp Feature: domain Description: CzcD Location: 8754-9630 bp Feature: domain Description: CzcD Location: 8 754-9630 bp Feature: gene Location: 9730-9942 bp Feature: gene Location: 11064-12839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11322-12021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11322-12021 bp Feature: gene Location: 13147-14697 bp Feature: domain Description: SufI Location: 13189-14668 bp Feature: domain Description: SufI Location: 1318 9-14668 bp Feature: gene Location: 15428-15901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CzcD (COG1230), RVT-GII, SufI (COG2132)

Seq: PYWJ01000084.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_84_length_1891_cov_1146.47_ID_167, whole genome shotgun sequence (1891 bp)
Overview 1 RT 1: 90-1644 bp Neighborhood of RT #1 [90, 1817] RVT-GII GIIM Feature: gene Location: 90-230 bp Feature: gene Location: 552-1817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753-1368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753-1368 bp Feature: domain Description: GIIM Note: maturase Location: 1425-1644 bp Feature: domain Description: GIIM Note: maturase Location: 1425-1644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PYWJ01000086.1 Lysinibacillus chungkukjangi strain 2RL32 NODE_86_length_1874_cov_201.999_ID_171, whole genome shotgun sequence (1874 bp)
Overview 1 RT 1: 526-1633 bp Neighborhood of RT #1 [526, 1788] RVT-GII GIIM Feature: gene Location: 526-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736-1351 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1633 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)