myRT

myRT report for GCA_003049665.1_ASM304966v1

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Seq: PYWM01000001.1 Lysinibacillus mangiferihumi strain M-GX18 NODE_1_length_370994_cov_11.2545_ID_1, whole genome shotgun sequence (370994 bp)
Overview 1 RT 1: 56828-63448 bp Neighborhood of RT #1 [56828, 63450] trpA recJ RVT-GII recJ ssDNA-exonuc_C PRK02304 Feature: gene Location: 56828-57622 bp Feature: domain Description: trpA Location: 56849-57593 bp Feature: domain Description: trpA Location: 56849-57593 bp Feature: gene Location: 57813-58103 bp Feature: domain Description: recJ Location: 57897-58086 bp Feature: domain Description: recJ Location: 57897-58086 bp Feature: gene Location: 58809-60698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59139-59877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591 39-59877 bp Feature: gene Location: 60830-62923 bp Feature: domain Description: recJ Location: 60863-62270 bp Feature: domain Description: recJ Location: 60863-62270 bp Feature: domain Description: ssDNA-exonuc_C Location: 62288-62885 bp Feature: domain Description: ssDNA-exonuc_C Location: 62288-62885 bp Feature: gene Location: 62938-63450 bp Feature: domain Description: PRK02304 Location: 62941-63448 bp Feature: domain Description: PRK02304 Location: 62941 -63448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trpA (TIGR00262), recJ (TIGR00644), RVT-GII, ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional)

Seq: PYWM01000027.1 Lysinibacillus mangiferihumi strain M-GX18 NODE_27_length_67003_cov_12.1433_ID_53, whole genome shotgun sequence (67003 bp)
Overview 1 RT 1: 40758-48258 bp Neighborhood of RT #1 [40758, 48281] ligA pcrA RVT-GII HNHc pcrA PcrB_like Feature: gene Location: 40758-42755 bp Feature: domain Description: ligA Location: 40764-42750 bp Feature: domain Description: ligA Location: 40764-42 750 bp Feature: gene Location: 42770-43291 bp Feature: domain Description: pcrA Location: 42830-43283 bp Feature: domain Description: pcrA Location: 42 830-432 83 bp Feature: gene Location: 43317-45095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43611-44361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43611-44361 bp Feature: domain Description: HNHc Note: nucleases Location: 44904-44988 bp Feature: domain Description: HNHc Note: nucleases Location: 44904-44988 bp Feature: gene Location: 45713-47560 bp Feature: domain Description: pcrA Location: 45737-47531 bp Feature: domain Description: pcrA Location: 45737-47531 bp Feature: gene Location: 47592-48281 bp Feature: domain Description: PcrB_like Location: 47613-48258 bp Feature: domain Description: PcrB_like Location: 47613-482 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligA (PRK14351), pcrA (TIGR01073), RVT-GII, HNHc (smart00507), PcrB_like (cd02812)

Seq: PYWM01000085.1 Lysinibacillus mangiferihumi strain M-GX18 NODE_87_length_1874_cov_58.7144_ID_173, whole genome shotgun sequence (1874 bp)
Overview 1 RT 1: 76-1825 bp Neighborhood of RT #1 [76, 1825] RVT-GII GIIM Feature: gene Location: 76-1341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-895 bp Feature: domain Description: GIIM Note: maturase Location: 946-1168 bp Feature: domain Description: GIIM Note: maturase Location: 946-1168 bp Feature: gene Location: 1592-1825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)