myRT

myRT report for GCA_003049865.1_ASM304986v1

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Seq: PIEV01000027.1 Vibrio splendidus strain ZF_41 Contig_27, whole genome shotgun sequence (83004 bp)
Overview 1 RT 1: 68247-75015 bp Neighborhood of RT #1 [68247, 75020] MhpC MhpC RVT-Retrons KOG1141 pheT pheS Feature: gene Location: 68247-69038 bp Feature: domain Description: MhpC Location: 68346-68718 bp Feature: domain Description: MhpC Location: 68346-6871 8 bp Feature: domain Description: MhpC Location: 68736-69018 bp Feature: domain Description: MhpC Location: 68736-6901 8 bp Feature: gene Location: 69241-69393 bp Feature: gene Location: 69444-71387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69582-70272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69582-70272 bp Feature: domain Description: KOG1141 Location: 70314-70602 bp Feature: domain Description: KOG1 1 41 Location: 7031 4-70602 bp Feature: gene Location: 71520-73925 bp Feature: domain Description: pheT Location: 71523-73923 bp Feature: domain Description: pheT Location: 71 523-73923 bp Feature: gene Location: 73944-75020 bp Feature: domain Description: pheS Location: 74037-75015 bp Feature: domain Description: pheS Location: 74037-7501 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-Retrons, KOG1141 (KOG1141, Predicted histone methyl transferase ), pheT (PRK09616), pheS (TIGR00468)

Seq: PIEV01000006.1 Vibrio splendidus strain ZF_41 Contig_6, whole genome shotgun sequence (206813 bp)
Overview 1 RT 1: 300-5468 bp Neighborhood of RT #1 [300, 5468] HipB int RVT-UG15 mepA Feature: gene Location: 300-608 bp Feature: domain Description: HipB Location: 321-507 bp Feature: domain Description: HipB Location: 32 1-507 bp Feature: gene Location: 645-1613 bp Feature: domain Description: int Location: 765-1587 bp Feature: domain Description: int Location: 765-1587 bp Feature: gene Location: 1979-3580 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 2390-2795 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 2 390-2 795 bp Feature: gene Location: 4045-4884 bp Feature: domain Description: mepA Location: 4084-4879 bp Feature: domain Description: mepA Location: 4084-4879 bp Feature: gene Location: 5160-5468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), int (PHA02601), RVT-UG15, mepA (PRK09429)

Seq: PIEV01000007.1 Vibrio splendidus strain ZF_41 Contig_7, whole genome shotgun sequence (196869 bp)
Overview 1 RT 1: 192505-196786 bp Neighborhood of RT #1 [192505, 196786] TPR YdcF-like GstA RVT-Retrons Feature: gene Location: 192505-193602 bp Feature: domain Description: TPR Location: 192751-192964 bp Feature: domain Description: TPR Location: 192751-192964 bp Feature: domain Description: YdcF-like Location: 193087-193492 bp Feature: domain Description: YdcF-like Location: 193 087-193 492 bp Feature: gene Location: 194087-194761 bp Feature: domain Description: GstA Location: 194090-194678 bp Feature: domain Description: GstA Location: 194090-194678 bp Feature: gene Location: 194932-195849 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 195034-195619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19503 4-195619 bp Feature: gene Location: 195836-196786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), YdcF-like (cl00630), GstA (COG0625), RVT-Retrons