myRT

myRT report for GCA_003049905.1_ASM304990v1

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Seq: PIFE01000032.1 Vibrio splendidus strain ZS_183 Contig_32, whole genome shotgun sequence (53321 bp)
Overview 1 RT 1: 41338-47935 bp Neighborhood of RT #1 [41338, 47935] groES groEL RVT_N RVT-GII GIIM HNHc PAS_3 GGDEF Feature: gene Location: 41338-41682 bp Feature: domain Description: groES Location: 41395-41680 bp Feature: domain Description: groES Location: 41 395-41 680 bp Feature: gene Location: 41734-43380 bp Feature: domain Description: groEL Location: 41740-43360 bp Feature: domain Description: groEL Location: 41 740-43360 bp Feature: gene Location: 44441-46165 bp Feature: domain Description: RVT_N Location: 44564-44807 bp Feature: domain Description: RVT_N Location: 44564-44807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44852-45497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44852-45497 bp Feature: domain Description: GIIM Note: maturase Location: 45548-45782 bp Feature: domain Description: GIIM Note: maturase Location: 45548-45782 bp Feature: domain Description: HNHc Note: nucleases Location: 45998-46160 bp Feature: domain Description: HNHc Note: nucleases Location: 45998-461 60 bp Feature: gene Location: 46692-47708 bp Feature: domain Description: PAS_3 Location: 46878-47133 bp Feature: domain Description: PAS_3 Location: 46878-471 33 bp Feature: domain Description: GGDEF Location: 47136-47694 bp Feature: domain Description: GGDEF Location: 471 36-47694 bp Feature: gene Location: 47753-47935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PAS_3 (pfam08447), GGDEF (TIGR00254)

Seq: PIFE01000008.1 Vibrio splendidus strain ZS_183 Contig_8, whole genome shotgun sequence (193607 bp)
Overview 1 RT 1: 64926-73694 bp Neighborhood of RT #1 [64926, 73694] HSDR_N_2 RVT-UG1 Feature: gene Location: 64926-67295 bp Feature: domain Description: HSDR_N_2 Location: 65088-65286 bp Feature: domain Description: HSDR_N_2 Location: 65088-652 86 bp Feature: gene Location: 67413-67826 bp Feature: gene Location: 67895-71743 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 68537-69056 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 68537-69056 bp Feature: gene Location: 71947-72087 bp Feature: gene Location: 72111-73694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HSDR_N_2 (pfam13588), RVT-UG1