myRT

myRT report for GCA_003049925.1_ASM304992v1

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Seq: PIEZ01000017.1 Vibrio splendidus strain ZS_213 Contig_17, whole genome shotgun sequence (115347 bp)
Overview 1 RT 1: 114-5573 bp Neighborhood of RT #1 [114, 5573] TIGR02646 COG3950 RVT-Retrons COG5545 Feature: gene Location: 114-917 bp Feature: domain Description: TIGR02646 Location: 189-723 bp Feature: domain Description: TIGR02646 Location: 1 89-723 bp Feature: gene Location: 904-2517 bp Feature: domain Description: COG3950 Location: 1087-2440 bp Feature: domain Description: COG3950 Location: 1 087-2440 bp Feature: gene Location: 2520-3632 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2790-3387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2790-3387 bp Feature: gene Location: 3972-5225 bp Feature: domain Description: COG5545 Location: 4242-5022 bp Feature: domain Description: COG5545 Location: 4242-5022 bp Feature: gene Location: 5319-5573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG5545 (Predicted P-loop ATPase and inactivated derivatives )

Seq: PIEZ01000024.1 Vibrio splendidus strain ZS_213 Contig_24, whole genome shotgun sequence (86470 bp)
Overview 1 RT 1: 16752-24457 bp Neighborhood of RT #1 [16752, 24457] am_tr_V_VC1184 COG4340 RVT-Retrons PRK15369 Feature: gene Location: 16752-17987 bp Feature: domain Description: am_tr_V_VC1184 Location: 16761-17961 bp Feature: domain Description: am_tr_V_VC1184 Location: 16761-17961 bp Feature: gene Location: 17971-18723 bp Feature: domain Description: COG4340 Location: 18061-18721 bp Feature: domain Description: COG4340 Location: 18061-1872 1 bp Feature: gene Location: 19739-22084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19844-20495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19844-2 0495 bp Feature: gene Location: 22448-24187 bp Feature: domain Description: PRK15369 Location: 23240-23561 bp Feature: domain Description: PRK15369 Location: 2 32 40-2 3561 bp Feature: gene Location: 24296-24457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT am_tr_V_VC1184 (TIGR01976), COG4340 (Predicted dioxygenase, 2-oxoglutarate and Fe-dependent (2OG-Fe) dioxygenase superfamily ), RVT-Retrons, PRK15369 (two component system response regulator)

Seq: PIEZ01000028.1 Vibrio splendidus strain ZS_213 Contig_28, whole genome shotgun sequence (77493 bp)
Overview 1 RT 1: 52254-61050 bp Neighborhood of RT #1 [52254, 61055] GstA RVT-UG1 nitrilase_Rim1_like PRK05096 Feature: gene Location: 52254-52928 bp Feature: domain Description: GstA Location: 52257-52842 bp Feature: domain Description: GstA Location: 52257-52842 bp Feature: gene Location: 53254-53682 bp Feature: gene Location: 53691-57404 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 54300-54792 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 543 00-54792 bp Feature: domain Description: nitrilase_Rim1_like Location: 56775-57099 bp Feature: domain Description: nitrilase_Rim1_like Location: 56775-57099 bp Feature: gene Location: 57633-59654 bp Feature: gene Location: 60012-61055 bp Feature: domain Description: PRK05096 Location: 60015-61050 bp Feature: domain Description: PRK05096 Location: 60015-61050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GstA (COG0625), RVT-UG1, nitrilase_Rim1_like (cd07574), PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional)