myRT

myRT report for GCA_003049975.1_ASM304997v1

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Seq: PIFH01000001.1 Vibrio splendidus strain ZS_138 Contig_1, whole genome shotgun sequence (283850 bp)
Overview 1 RT 1: 87140-91665 bp Neighborhood of RT #1 [87140, 91673] PRK03606 COG3748 RVT-UG2 GrpB Feature: gene Location: 87140-87700 bp Feature: domain Description: PRK03606 Location: 87158-87632 bp Feature: domain Description: PRK03606 Location: 871 58-87632 bp Feature: gene Location: 87715-89034 bp Feature: domain Description: COG3748 Location: 87721-89026 bp Feature: domain Description: COG3748 Location: 87721 -89026 bp Feature: gene Location: 89558-90841 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89762-90545 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89762-90545 bp Feature: gene Location: 90944-91183 bp Feature: gene Location: 91200-91673 bp Feature: domain Description: GrpB Location: 91236-91665 bp Feature: domain Description: GrpB Location: 91 236-91 665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03606 (ureidoglycolate lyase), COG3748 (Uncharacterized membrane protein ), RVT-UG2, GrpB (pfam04229)

Seq: PIFH01000030.1 Vibrio splendidus strain ZS_138 Contig_30, whole genome shotgun sequence (67630 bp)
Overview 1 RT 1: 63079-67585 bp Neighborhood of RT #1 [63079, 67585] artM RVT-GII GIIM Feature: gene Location: 63079-63747 bp Feature: domain Description: artM Location: 63088-63742 bp Feature: domain Description: artM Location: 63088-63742 bp Feature: gene Location: 64073-65497 bp Feature: gene Location: 65592-66938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65874-66492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65874-66492 bp Feature: domain Description: GIIM Note: maturase Location: 66540-66744 bp Feature: domain Description: GIIM Note: maturase Location: 66540-66744 bp Feature: gene Location: 67144-67305 bp Feature: gene Location: 67442-67585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT artM (PRK11122), RVT-GII, GIIM (pfam08388)

Seq: PIFH01000031.1 Vibrio splendidus strain ZS_138 Contig_31, whole genome shotgun sequence (65301 bp)
Overview 1 RT 1: 13785-15993 bp Neighborhood of RT #1 [13785, 15993] HTH_19 RVT-Retrons Feature: gene Location: 13785-13940 bp Feature: gene Location: 13982-14290 bp Feature: domain Description: HTH_19 Location: 13994-14162 bp Feature: domain Description: HTH_19 Location: 13 994-14162 bp Feature: gene Location: 14268-15221 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14451-14985 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14451-14985 bp Feature: gene Location: 15405-15758 bp Feature: gene Location: 15799-15993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), RVT-Retrons