myRT

myRT report for GCA_003050145.1_ASM305014v1

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Seq: PIFA01000169.1 Vibrio splendidus strain ZS_211 Contig_169, whole genome shotgun sequence (6652 bp)
Overview 1 RT 1: 321-3877 bp Neighborhood of RT #1 [321, 3882] RVT-GII GIIM MhpC LysR Feature: gene Location: 321-452 bp Feature: gene Location: 662-1975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 -1 493 bp Feature: domain Description: GIIM Note: maturase Location: 1547-1748 bp Feature: domain Description: GIIM Note: maturase Location: 1 547-1 748 bp Feature: gene Location: 2048-2893 bp Feature: domain Description: MhpC Location: 2162-2873 bp Feature: domain Description: MhpC Location: 21 62-2873 bp Feature: gene Location: 2959-3882 bp Feature: domain Description: LysR Location: 3019-3877 bp Feature: domain Description: LysR Location: 301 9-3877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), LysR (COG0583), RVT-GII, GIIM (pfam08388)

Seq: PIFA01000079.1 Vibrio splendidus strain ZS_211 Contig_79, whole genome shotgun sequence (24256 bp)
Overview 1 RT 1: 13391-19746 bp Neighborhood of RT #1 [13391, 20018] LacI PBP1_LacI_like_9 RVT_N RVT-GII GIIM Peptidase_M66 TagA Feature: gene Location: 13391-14404 bp Feature: domain Description: LacI Location: 13418-13553 bp Feature: domain Description: LacI Location: 13418-13553 bp Feature: domain Description: PBP1_LacI_like_9 Location: 13592-14384 bp Feature: domain Description: PBP1_LacI_like_9 Location: 13592 -14384 bp Feature: gene Location: 14451-14633 bp Feature: gene Location: 14674-16305 bp Feature: RT Description: RVT_N Location: 14881-15124 bp Feature: RT Description: RVT_N Location: 14881-1512 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15169-15796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15169-15796 bp Feature: domain Description: GIIM Note: maturase Location: 15856-16081 bp Feature: domain Description: GIIM Note: maturase Location: 15856-16081 bp Feature: gene Location: 16341-16484 bp Feature: gene Location: 17364-20018 bp Feature: domain Description: Peptidase_M66 Location: 18168-19071 bp Feature: domain Description: Peptidase_M66 Location: 18168-19071 bp Feature: domain Description: TagA Location: 19461-19746 bp Feature: domain Description: TagA Location: 19461-19746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_LacI_like_9, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Peptidase_M66 (pfam10462), TagA (pfam12561)