myRT

myRT report for GCA_003050165.1_ASM305016v1

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Seq: PIFB01000024.1 Vibrio splendidus strain ZS_2 Contig_24, whole genome shotgun sequence (86000 bp)
Overview 1 RT 1: 14632-18814 bp 2 RT 2: 73006-78160 bp Neighborhood of RT #1 [14632, 18870] RVT_N RVT-GII GIIM HigB-like_toxin antidote_HigA Neighborhood of RT #2 [73006, 78160] HEPN_Apea RVT_N RVT-GII GIIM Feature: gene Location: 14632-14820 bp Feature: gene Location: 14906-15472 bp Feature: gene Location: 16307-17788 bp Feature: domain Description: RVT_N Location: 16355-16607 bp Feature: domain Description: RVT_N Location: 1 6355-1 6607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16652-17279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6652-1 7279 bp Feature: domain Description: GIIM Note: maturase Location: 17336-17564 bp Feature: domain Description: GIIM Note: maturase Location: 1 7336-1 7564 bp Feature: gene Location: 18290-18568 bp Feature: domain Description: HigB-like_toxin Location: 18299-18566 bp Feature: domain Description: HigB-like_toxin Location: 1 8299-1 8566 bp Feature: gene Location: 18568-18870 bp Feature: domain Description: antidote_HigA Location: 18583-18814 bp Feature: domain Description: antidote_HigA Location: 1 8583-1 881 4 bp Feature: gene Location: 73006-74283 bp Feature: domain Description: HEPN_Apea Location: 73849-74080 bp Feature: domain Description: HEPN_Apea Location: 73849-74080 bp Feature: gene Location: 74537-75205 bp Feature: gene Location: 76015-77487 bp Feature: domain Description: RVT_N Location: 76063-76306 bp Feature: domain Description: RVT_N Location: 76063-76306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76351-76978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76351 -76978 bp Feature: domain Description: GIIM Note: maturase Location: 77038-77263 bp Feature: domain Description: GIIM Note: maturase Location: 77038-77263 bp Feature: gene Location: 77536-77775 bp Feature: gene Location: 77852-78160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HigB-like_toxin (pfam05015), antidote_HigA (TIGR02607), HEPN_Apea (pfam18739)

Seq: PIFB01000035.1 Vibrio splendidus strain ZS_2 Contig_35, whole genome shotgun sequence (55617 bp)
Overview 1 RT 1: 8556-11605 bp Neighborhood of RT #1 [8556, 11605] Phage_int_SAM_4 INT_IntI_C RVT-GII GIIM RVT-GII Feature: gene Location: 8556-9443 bp Feature: domain Description: Phage_int_SAM_4 Location: 8592-8832 bp Feature: domain Description: Phage_int_SAM_4 Location: 8592 -8832 bp Feature: domain Description: INT_IntI_C Location: 8868-9360 bp Feature: domain Description: INT_IntI_C Location: 8868-9360 bp Feature: gene Location: 9456-9620 bp Feature: gene Location: 9622-10281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9625-9835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962 5-9835 bp Feature: domain Description: GIIM Note: maturase Location: 9880-10090 bp Feature: domain Description: GIIM Note: maturase Location: 9880-10090 bp Feature: gene Location: 10288-10968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10570-10966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10570-10966 bp Feature: gene Location: 11254-11403 bp Feature: gene Location: 11429-11605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), RVT-GII, GIIM (pfam08388)

Seq: PIFB01000068.1 Vibrio splendidus strain ZS_2 Contig_68, whole genome shotgun sequence (2193 bp)
Overview 1 RT 1: 165-2015 bp Neighborhood of RT #1 [165, 2015] RVT-GII GIIM RVT_N Feature: gene Location: 165-1367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 1-858 bp Feature: domain Description: GIIM Note: maturase Location: 918-1143 bp Feature: domain Description: GIIM Note: maturase Location: 918-1143 bp Feature: gene Location: 1422-1796 bp Feature: domain Description: RVT_N Location: 1629-1794 bp Feature: domain Description: RVT_N Location: 1629-1794 bp Feature: gene Location: 1872-2015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)