myRT

myRT report for GCA_003050205.1_ASM305020v1

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Seq: PIFC01000013.1 Vibrio splendidus strain ZS_198 Contig_13, whole genome shotgun sequence (144888 bp)
Overview 1 RT 1: 35983-42399 bp Neighborhood of RT #1 [35983, 42497] thrS DUF3187 RVT-UG17 SLATT_5 Spo0M Feature: gene Location: 35983-37911 bp Feature: domain Description: thrS Location: 35989-37894 bp Feature: domain Description: thrS Location: 35989-37894 bp Feature: gene Location: 38309-39292 bp Feature: domain Description: DUF3187 Location: 38351-39290 bp Feature: domain Description: DUF31 87 Location: 38351 -39290 bp Feature: gene Location: 39398-40672 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39578-40160 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 39578-401 60 bp Feature: gene Location: 40714-41289 bp Feature: domain Description: SLATT_5 Location: 40738-41275 bp Feature: domain Description: SLATT_5 Location: 40738-41 275 bp Feature: gene Location: 41754-42497 bp Feature: domain Description: Spo0M Location: 41760-42399 bp Feature: domain Description: Spo0M Location: 41 760-42399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thrS (TIGR00418), DUF3187 (pfam11383), RVT-UG17, SLATT_5 (pfam18160), Spo0M (pfam07070)

Seq: PIFC01000066.1 Vibrio splendidus strain ZS_198 Contig_66, whole genome shotgun sequence (2167 bp)
Overview 1 RT 1: 113-1963 bp Neighborhood of RT #1 [113, 1963] RVT_N RVT-GII GIIM Feature: gene Location: 113-1744 bp Feature: domain Description: RVT_N Location: 320-563 bp Feature: domain Description: RVT_N Location: 32 0-563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-1235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-12 35 bp Feature: domain Description: GIIM Note: maturase Location: 1295-1520 bp Feature: domain Description: GIIM Note: maturase Location: 12 95-152 0 bp Feature: gene Location: 1820-1963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PIFC01000067.1 Vibrio splendidus strain ZS_198 Contig_67, whole genome shotgun sequence (1959 bp)
Overview 1 RT 1: 89-1679 bp Neighborhood of RT #1 [89, 1870] RVT-GII GIIM Feature: gene Location: 89-238 bp Feature: gene Location: 524-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1679 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)