myRT

myRT report for GCA_003050405.1_ASM305040v1

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Seq: PIFU01000040.1 Vibrio splendidus strain 5S_122 Contig_40, whole genome shotgun sequence (47693 bp)
Overview 1 RT 1: 10932-15476 bp Neighborhood of RT #1 [10932, 15850] SSL2 DEXHc_cas3 RVT-UG11 ComA-like_MBL-fold Feature: gene Location: 10932-11462 bp Feature: gene Location: 11456-12838 bp Feature: domain Description: SSL2 Location: 11492-12530 bp Feature: domain Description: SSL2 Location: 1 1 492-1 2530 bp Feature: domain Description: DEXHc_cas3 Location: 12575-12809 bp Feature: domain Description: DEXHc_cas3 Location: 1 2575-1 2809 bp Feature: gene Location: 12980-13750 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 13112-13562 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 31 1 2-1 3562 bp Feature: gene Location: 13856-14041 bp Feature: gene Location: 14813-15850 bp Feature: domain Description: ComA-like_MBL-fold Location: 14828-15476 bp Feature: domain Description: ComA-like_MBL-fold Location: 1 4828-1 5476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), DEXHc_cas3 (cd17930), RVT-UG11, ComA-like_MBL-fold (cd07731)

Seq: PIFU01000076.1 Vibrio splendidus strain 5S_122 Contig_76, whole genome shotgun sequence (2167 bp)
Overview 1 RT 1: 205-1831 bp Neighborhood of RT #1 [205, 2055] RVT_N RVT-GII GIIM Feature: gene Location: 205-348 bp Feature: gene Location: 424-2055 bp Feature: domain Description: RVT_N Location: 631-874 bp Feature: domain Description: RVT_N Location: 631-874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 919-1546 bp Feature: domain Description: GIIM Note: maturase Location: 1606-1831 bp Feature: domain Description: GIIM Note: maturase Location: 1606-1831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)