myRT

myRT report for GCA_003050485.1_ASM305048v1

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Seq: PIFX01000021.1 Vibrio splendidus strain 1S_14 Contig_21, whole genome shotgun sequence (73871 bp)
Overview 1 RT 1: 5276-10609 bp Neighborhood of RT #1 [5276, 10609] DUF1837 RVT-Retrons TIR_2 Feature: gene Location: 5276-6199 bp Feature: domain Description: DUF1837 Location: 5405-6134 bp Feature: domain Description: DUF1 837 Location: 5405-61 34 bp Feature: gene Location: 6643-7341 bp Feature: gene Location: 7486-9081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7738-8350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7738-8350 bp Feature: domain Description: TIR_2 Location: 8686-9070 bp Feature: domain Description: TIR_2 Location: 8686-9070 bp Feature: gene Location: 10171-10356 bp Feature: gene Location: 10427-10609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), RVT-Retrons, TIR_2 (pfam13676)

Seq: PIFX01000034.1 Vibrio splendidus strain 1S_14 Contig_35, whole genome shotgun sequence (2996 bp)
Overview 1 RT 1: 3-2373 bp Neighborhood of RT #1 [3, 2373] PRK10602 RVT_N RVT-GII GIIM Feature: gene Location: 3-398 bp Feature: domain Description: PRK10602 Location: 6-387 bp Feature: domain Description: PRK10602 Location: 6-387 bp Feature: gene Location: 523-2154 bp Feature: RT Description: RVT_N Location: 730-973 bp Feature: RT Description: RVT_N Location: 730-973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018-1645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1018-1645 bp Feature: domain Description: GIIM Note: maturase Location: 1705-1930 bp Feature: domain Description: GIIM Note: maturase Location: 1705-1930 bp Feature: gene Location: 2230-2373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10602 (murein tripeptide amidase MpaA), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)