myRT

myRT report for GCA_003053725.1_ASM305372v1

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Seq: QAYC01000027.1 Rhodovulum kholense strain DSM 19783 Ga0183464_127, whole genome shotgun sequence (25221 bp)
Overview 1 RT 1: 1209-11942 bp Neighborhood of RT #1 [1209, 11956] RVT-CRISPR Cas1_I-II-III endolysin_R21_like Feature: gene Location: 1209-3317 bp Feature: gene Location: 3815-8005 bp Feature: gene Location: 8807-10777 bp Ori: PTW39239.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9029-9632 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9029-9632 bp Feature: domain Description: Cas1_I-II-III Location: 9785-10733 bp Feature: domain Description: Cas1 _I-II-III Location: 9785-1 0733 bp Feature: gene Location: 11151-11510 bp Feature: gene Location: 11489-11956 bp Ori: PTW39241.1 Feature: domain Description: endolysin_R21_like Location: 11525-11942 bp Feature: domain Description: endolysin_R21 _like Location: 1 1 525-1 1 942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), endolysin_R21_like

Seq: QAYC01000026.1 Rhodovulum kholense strain DSM 19783 Ga0183464_126, whole genome shotgun sequence (36059 bp)
Overview 1 RT 1: 26490-32236 bp Neighborhood of RT #1 [26490, 32283] COG3547 HTH_XRE RVT-Retrons DUF4365 COG3666 DDE_Tnp_1_6 Feature: gene Location: 26490-27557 bp Ori: PTW39763.1 Feature: domain Description: COG3547 Location: 26532-27501 bp Feature: domain Description: COG3547 Location: 2 6532 -2 7501 bp Feature: gene Location: 28238-28543 bp Ori: PTW39764.1 Feature: domain Description: HTH_XRE Location: 28250-28412 bp Feature: domain Description: HTH_XRE Location: 2 82 50-2 8412 bp Feature: gene Location: 28524-29465 bp Ori: PTW39765.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28743-29259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 8743-2 92 59 bp Feature: gene Location: 29610-30578 bp Ori: PTW39766.1 Feature: domain Description: DUF4365 Location: 29637-30063 bp Feature: domain Description: DUF4365 Location: 2 9637-30063 bp Feature: gene Location: 30844-32283 bp Ori: PTW39767.1 Feature: domain Description: COG3666 Location: 30865-31330 bp Feature: domain Description: COG3666 Location: 30865-31330 bp Feature: domain Description: DDE_Tnp_1_6 Location: 31891-32236 bp Feature: domain Description: DDE_Tnp_1_6 Location: 31891-32 2 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), HTH_XRE (smart00530), RVT-Retrons, DUF4365 (pfam14280), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)