myRT

myRT report for GCA_003054145.1_ASM305414v1

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Seq: QBKL01000015.1 Pedobacter sp. OK291 Ga0189736_105, whole genome shotgun sequence (757658 bp)
Overview 1 RT 1: 429854-438528 bp Neighborhood of RT #1 [429854, 438707] RVT-GII GIIM RVT-GII GIIM Sigma70_r4_2 Laminin_G_3 Big_4 Glyco_hydro_127 Feature: gene Location: 429854-430036 bp Feature: gene Location: 430128-430295 bp Feature: gene Location: 430701-431963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430905-431562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430905-431 562 bp Feature: domain Description: GIIM Note: maturase Location: 431646-431874 bp Feature: domain Description: GIIM Note: maturase Location: 431 646-431 874 bp Feature: gene Location: 432237-433511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432432-433047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432432-433047 bp Feature: domain Description: GIIM Note: maturase Location: 433104-433332 bp Feature: domain Description: GIIM Note: maturase Location: 4331 04-433332 bp Feature: gene Location: 433661-435034 bp Feature: domain Description: Sigma70_r4_2 Location: 434903-434987 bp Feature: domain Description: Sigma70_r4_2 Location: 434903-434987 bp Feature: gene Location: 435642-438707 bp Feature: domain Description: Laminin_G_3 Location: 435897-436386 bp Feature: domain Description: Laminin_G_3 Location: 435897-436386 bp Feature: domain Description: Big_4 Location: 436515-436689 bp Feature: domain Description: Big_4 Location: 43651 5-436689 bp Feature: domain Description: Glyco_hydro_127 Location: 436803-438528 bp Feature: domain Description: Glyco_hydro_1 27 Location: 436803-438528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Sigma70_r4_2 (pfam08281), Laminin_G_3 (pfam13385), Big_4 (pfam07532), Glyco_hydro_127 (pfam07944)

Seq: QBKL01000016.1 Pedobacter sp. OK291 Ga0189736_106, whole genome shotgun sequence (726461 bp)
Overview 1 RT 1: 198170-206814 bp Neighborhood of RT #1 [198170, 206828] WGR_DNA_ligase RVT-Retrons LytS Feature: gene Location: 198170-199828 bp Feature: gene Location: 199812-203150 bp Feature: domain Description: WGR_DNA_ligase Location: 199830-200052 bp Feature: domain Description: WGR_DNA_ligase Location: 199830-2 00052 bp Feature: gene Location: 203162-204691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 203702-204317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 03702 -2 04317 bp Feature: gene Location: 204905-205051 bp Feature: gene Location: 205086-206828 bp Feature: domain Description: LytS Location: 206208-206814 bp Feature: domain Description: LytS Location: 2 062 08-2 06814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, LytS (COG3275)