myRT

myRT report for GCA_003054695.1_ASM305469v1

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Seq: QAZA01000014.1 Verrucomicrobia bacterium LW23 LW23_contig_21, whole genome shotgun sequence (105480 bp)
Overview 1 RT 1: 82356-90548 bp Neighborhood of RT #1 [82356, 91036] DDE_3 COG3415 RVT_N RVT-GII GIIM Peptidase_C14 Peptidase_C14 EstA Feature: gene Location: 82356-82793 bp Feature: domain Description: DDE_3 Location: 82374-82710 bp Feature: domain Description: DDE_3 Location: 82374-8271 0 bp Feature: gene Location: 82879-83403 bp Feature: domain Description: COG3415 Location: 82951-83374 bp Feature: domain Description: COG341 5 Location: 82951 -83374 bp Feature: gene Location: 83676-85223 bp Feature: RT Description: RVT_N Location: 83733-83976 bp Feature: RT Description: RVT_N Location: 83733-83976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84021-84675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84021 -84675 bp Feature: domain Description: GIIM Note: maturase Location: 84732-84960 bp Feature: domain Description: GIIM Note: maturase Location: 84732-84960 bp Feature: gene Location: 86829-87608 bp Feature: domain Description: Peptidase_C14 Location: 86883-87420 bp Feature: domain Description: Peptidase_C1 4 Location: 86883-87420 bp Feature: gene Location: 87683-91036 bp Feature: domain Description: Peptidase_C14 Location: 87761-88391 bp Feature: domain Description: Peptidase_C1 4 Location: 87761 -88391 bp Feature: domain Description: EstA Location: 90347-90548 bp Feature: domain Description: EstA Location: 90347-90548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), COG3415 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Peptidase_C14 (pfam00656), EstA (COG1075)