myRT

myRT report for GCA_003054705.1_ASM305470v1

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Seq: QAYX01000022.1 Opitutus sp. ER46 ER46_contig_11_coverage:, whole genome shotgun sequence (659070 bp)
Overview 1 RT 1: 380059-384427 bp Neighborhood of RT #1 [380059, 384427] TnpB_IS66 LZ_Tnp_IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 380059-380406 bp Feature: domain Description: TnpB_IS66 Location: 380086-380377 bp Feature: domain Description: TnpB_IS66 Location: 380086-380377 bp Feature: gene Location: 380449-381369 bp Feature: domain Description: LZ_Tnp_IS66 Location: 380512-380725 bp Feature: domain Description: LZ_Tnp_IS66 Location: 38051 2-380725 bp Feature: domain Description: DDE_Tnp_IS66 Location: 380926-381334 bp Feature: domain Description: DDE_Tnp_IS66 Location: 380926-381 334 bp Feature: gene Location: 382317-383471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382320-382929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382320-382929 bp Feature: domain Description: GIIM Note: maturase Location: 382986-383214 bp Feature: domain Description: GIIM Note: maturase Location: 382986-38321 4 bp Feature: gene Location: 383557-384138 bp Feature: domain Description: DDE_Tnp_IS66 Location: 383575-383986 bp Feature: domain Description: DDE_Tnp_IS66 Location: 383575-383986 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 384007-384118 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 384007-3841 1 8 bp Feature: gene Location: 384224-384427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: QAYX01000024.1 Opitutus sp. ER46 ER46_contig_3_coverage:, whole genome shotgun sequence (732465 bp)
Overview 1 RT 1: 126633-133426 bp Neighborhood of RT #1 [126633, 133431] DUF1349 PRK12391 RVT-GII GIIM RlmK DUF481 Feature: gene Location: 126633-127340 bp Feature: domain Description: DUF1349 Location: 126789-127296 bp Feature: domain Description: DUF1349 Location: 12 6789-12 72 96 bp Feature: gene Location: 127522-128841 bp Feature: domain Description: PRK12391 Location: 127540-128809 bp Feature: domain Description: PRK12 391 Location: 12 7540-12 8809 bp Feature: gene Location: 129562-130944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129898-130570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 9898-130570 bp Feature: domain Description: GIIM Note: maturase Location: 130642-130840 bp Feature: domain Description: GIIM Note: maturase Location: 130642 -130840 bp Feature: gene Location: 131304-132233 bp Feature: domain Description: RlmK Location: 131607-132147 bp Feature: domain Description: RlmK Location: 131607-132 147 bp Feature: gene Location: 132400-133431 bp Feature: domain Description: DUF481 Location: 132811-133426 bp Feature: domain Description: DUF481 Location: 132 811-13342 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1349 (pfam07081), PRK12391 (TrpB-like pyridoxal phosphate-dependent enzyme), RVT-GII, GIIM (pfam08388), RlmK (COG1092), DUF481 (pfam04338)