myRT

myRT report for GCA_003054775.1_ASM305477v1

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Seq: QAPE01000011.1 Saccharospirillum mangrovi strain HK-33 Scaffold11, whole genome shotgun sequence (116383 bp)
Overview 1 RT 1: 92858-97888 bp Neighborhood of RT #1 [92858, 98130] RVT-Retrons HTH_21 rve Feature: gene Location: 92858-93511 bp Feature: gene Location: 93640-94863 bp Feature: gene Location: 95042-96196 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95294-95915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95294-9591 5 bp Feature: gene Location: 97295-97717 bp Feature: domain Description: HTH_21 Location: 97406-97553 bp Feature: domain Description: HTH_21 Location: 97406-97553 bp Feature: gene Location: 97744-98130 bp Feature: domain Description: rve Location: 97753-97888 bp Feature: domain Description: rve Location: 97753-97888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_21 (pfam13276), rve (pfam00665)

Seq: QAPE01000008.1 Saccharospirillum mangrovi strain HK-33 Scaffold8, whole genome shotgun sequence (136181 bp)
Overview 1 RT 1: 15992-25431 bp Neighborhood of RT #1 [15992, 25460] PRK05454 CybB RVT-UG3 RVT-UG8 OsmC TIGR03549 Feature: gene Location: 15992-17866 bp Feature: domain Description: PRK05454 Location: 16004-17837 bp Feature: domain Description: PRK05454 Location: 16004-17837 bp Feature: gene Location: 17911-18450 bp Feature: domain Description: CybB Location: 17923-18448 bp Feature: domain Description: CybB Location: 1792 3-18448 bp Feature: gene Location: 18912-20111 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 19200-19665 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 192 00-19665 bp Feature: gene Location: 20104-22092 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 20614-21055 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 0614-2 1055 bp Feature: gene Location: 22700-23101 bp Feature: domain Description: OsmC Location: 22805-23084 bp Feature: domain Description: OsmC Location: 2 2 805-2 3084 bp Feature: gene Location: 23277-25460 bp Feature: domain Description: TIGR03549 Location: 23283-25431 bp Feature: domain Description: TIGR03549 Location: 2 32 83-2 5431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05454 (glucans biosynthesis glucosyltransferase MdoH), CybB (COG3038), RVT-UG3, RVT-UG8, OsmC (pfam02566), TIGR03549 (YcaO domain protein)