myRT

myRT report for GCA_003055085.1_ASM305508v1

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Seq: NAZD01000109.1 Bacillus sporothermodurans strain DSM 10599 DSM_contig_109, whole genome shotgun sequence (23022 bp)
Overview 1 RT 1: 17102-22387 bp Neighborhood of RT #1 [17102, 22476] DNA_methylase DNA_methylase RVT-UG2 SIR2_2 Feature: gene Location: 17102-18823 bp Feature: gene Location: 18960-20210 bp Feature: domain Description: DNA_methylase Location: 19128-19791 bp Feature: domain Description: DNA_methylase Location: 1 91 28-1 9791 bp Feature: domain Description: DNA_methylase Location: 19815-20139 bp Feature: domain Description: DNA_methylase Location: 1 981 5-201 39 bp Feature: gene Location: 20322-21671 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 20550-21378 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 20550-21 378 bp Feature: gene Location: 21795-22013 bp Feature: gene Location: 22015-22476 bp Feature: domain Description: SIR2_2 Location: 22213-22387 bp Feature: domain Description: SIR2_2 Location: 2221 3-22387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_methylase (pfam00145), RVT-UG2, SIR2_2 (pfam13289)

Seq: NAZD01000293.1 Bacillus sporothermodurans strain DSM 10599 DSM_contig_293, whole genome shotgun sequence (1730 bp)
Overview 1 RT 1: 297-1365 bp Neighborhood of RT #1 [297, 1550] RVT-GII GIIM Feature: gene Location: 297-1550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1107 bp Feature: domain Description: GIIM Note: maturase Location: 1155-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1155-1365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NAZD01000047.1 Bacillus sporothermodurans strain DSM 10599 DSM_contig_47, whole genome shotgun sequence (53491 bp)
Overview 1 RT 1: 28460-30801 bp Neighborhood of RT #1 [28460, 30812] holin_SPP1 RVT-DGRs Avd_like Feature: gene Location: 28460-28684 bp Feature: domain Description: holin_SPP1 Location: 28463-28676 bp Feature: domain Description: holin_SPP1 Location: 28463 -28676 bp Feature: gene Location: 28677-28973 bp Feature: gene Location: 29067-30140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29277-29931 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29277-2993 1 bp Feature: gene Location: 30210-30407 bp Feature: gene Location: 30468-30812 bp Feature: domain Description: Avd_like Location: 30495-30801 bp Feature: domain Description: Avd_like Location: 3 0495-3 0801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT holin_SPP1 (TIGR01592), RVT-DGRs, Avd_like (cd16376)