myRT

myRT report for GCA_003055295.1_ASM305529v1

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Seq: QBEB01000006.1 Pseudomonas aeruginosa strain HIAE_PA21 6c, whole genome shotgun sequence (289521 bp)
Overview 1 RT 1: 83941-94611 bp Neighborhood of RT #1 [83941, 94676] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 83941-85794 bp Feature: domain Description: PRK05658 Location: 83953-85792 bp Feature: domain Description: PRK05658 Location: 83953-85792 bp Feature: gene Location: 85901-89638 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 86009-86666 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 86009-86666 bp Feature: domain Description: PRK09776 Location: 86879-87350 bp Feature: domain Description: PRK09776 Location: 86879-87350 bp Feature: domain Description: PAS Location: 87395-87932 bp Feature: domain Description: PAS Location: 87395-87932 bp Feature: domain Description: PRK10060 Location: 87941-89588 bp Feature: domain Description: PRK1 0060 Location: 87941 -89588 bp Feature: gene Location: 90719-92404 bp Feature: RT Description: RVT_N Location: 90776-91016 bp Feature: RT Description: RVT_N Location: 90776-91 01 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91064-91700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 064-91 700 bp Feature: domain Description: GIIM Note: maturase Location: 91754-91985 bp Feature: domain Description: GIIM Note: maturase Location: 91 754-91 985 bp Feature: domain Description: HNH Note: nucleases Location: 92237-92375 bp Feature: domain Description: HNH Note: nucleases Location: 92237-92375 bp Feature: gene Location: 93127-94248 bp Feature: domain Description: COG3177 Location: 93145-94237 bp Feature: domain Description: COG31 77 Location: 931 45-94237 bp Feature: gene Location: 94341-94676 bp Feature: domain Description: NERD Location: 94440-94611 bp Feature: domain Description: NERD Location: 94440-9461 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )
NERD (pfam08378)