myRT

myRT report for GCA_003055525.1_ASM305552v1

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Seq: QBEK01000003.1 Pseudomonas aeruginosa strain HIAE_PA12 3c, whole genome shotgun sequence (503309 bp)
Overview 1 RT 1: 339467-346870 bp Neighborhood of RT #1 [339467, 346980] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0387 SF2_C_SNF LysR Feature: gene Location: 339467-340912 bp Feature: domain Description: AdoMet_MTases Location: 339590-339956 bp Feature: domain Description: AdoMet_MTases Location: 339590-339956 bp Feature: gene Location: 341011-342042 bp Feature: domain Description: DEXHc_Snf Location: 341209-341455 bp Feature: domain Description: DEXHc_Snf Location: 341 209-341 455 bp Feature: gene Location: 342639-344357 bp Feature: RT Description: RVT_N Location: 342696-342933 bp Feature: RT Description: RVT_N Location: 342696-342933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342984-343635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342984-343635 bp Feature: domain Description: GIIM Note: maturase Location: 343689-343920 bp Feature: domain Description: GIIM Note: maturase Location: 343689-343920 bp Feature: domain Description: HNHc Note: nucleases Location: 344154-344310 bp Feature: domain Description: HNHc Note: nucleases Location: 3441 54-34431 0 bp Feature: gene Location: 344425-345684 bp Feature: domain Description: KOG0387 Location: 344464-344590 bp Feature: domain Description: KOG0387 Location: 344464-344590 bp Feature: domain Description: SF2_C_SNF Location: 345142-345520 bp Feature: domain Description: SF2_C_SNF Location: 3451 42-345520 bp Feature: gene Location: 345967-346980 bp Feature: domain Description: LysR Location: 345970-346870 bp Feature: domain Description: LysR Location: 345970-346870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), KOG0387 (KOG0387, Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) ), SF2_C_SNF (cd18793), LysR (COG0583)