myRT

myRT report for GCA_003056245.1_ASM305624v1

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Seq: MVDH01000001.1 Cellvibrio sp. 79 Scaffold_1, whole genome shotgun sequence (2347035 bp)
Overview 1 RT 1: 1935109-1938976 bp 2 RT 2: 2345508-2347033 bp Neighborhood of RT #1 [1935109, 1938976] RVT-Retrons DUF3037 Neighborhood of RT #2 [2345508, 2347033] COG2405 UPF0175 RVT-GII Feature: gene Location: 1935109-1935282 bp Feature: gene Location: 1935328-1936284 bp Feature: gene Location: 1936277-1937221 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1936385-1936979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 936385-1 936979 bp Feature: gene Location: 1937439-1938248 bp Feature: domain Description: DUF3037 Location: 1937463-1937820 bp Feature: domain Description: DUF3037 Location: 1 937463-1 937820 bp Feature: gene Location: 1938245-1938976 bp Feature: gene Location: 2345508-2346032 bp Feature: domain Description: COG2405 Location: 2345532-2346009 bp Feature: domain Description: COG2405 Location: 2345532-2346009 bp Feature: gene Location: 2346034-2346270 bp Feature: domain Description: UPF0175 Location: 2346049-2346256 bp Feature: domain Description: UPF01 75 Location: 2346049-2346256 bp Feature: gene Location: 2346260-2346778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2346455-2346743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2346455-2346743 bp Feature: gene Location: 2346782-2347033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF3037 (pfam11236), COG2405 (Predicted nucleic acid-binding protein, contains PIN domain ), UPF0175 (pfam03683), RVT-GII

Seq: MVDH01000003.1 Cellvibrio sp. 79 Scaffold_3, whole genome shotgun sequence (1795691 bp)
Overview 1 RT 1: 1574290-1580052 bp Neighborhood of RT #1 [1574290, 1580052] DUF3570 DUF3570 RhsA RVT-GII GIIM Feature: gene Location: 1574290-1575561 bp Feature: domain Description: DUF3570 Location: 1574404-1574605 bp Feature: domain Description: DUF3570 Location: 1574404-1574605 bp Feature: domain Description: DUF3570 Location: 1574626-1575370 bp Feature: domain Description: DUF3570 Location: 157462 6-1575370 bp Feature: gene Location: 1576101-1577702 bp Feature: domain Description: RhsA Location: 1577010-1577592 bp Feature: domain Description: RhsA Location: 1577010-1577592 bp Feature: gene Location: 1577739-1578947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1577934-1578588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1577934-1578588 bp Feature: domain Description: GIIM Note: maturase Location: 1578669-1578885 bp Feature: domain Description: GIIM Note: maturase Location: 1578669-1578885 bp Feature: gene Location: 1579132-1579530 bp Feature: gene Location: 1579801-1580052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3570 (pfam12094), RhsA (COG3209), RVT-GII, GIIM (pfam08388)