myRT

myRT report for GCA_003056895.1_ASM305689v1

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Seq: PYGX01000002.1 Enterobacter hormaechei strain AUH-ENM2 NODE_2_length_817040_cov_34.6407, whole genome shotgun sequence (817040 bp)
Overview 1 RT 1: 572999-578514 bp Neighborhood of RT #1 [572999, 578627] FocA PRK09692 RVT-Retrons Ogr_Delta Feature: gene Location: 572999-573928 bp Feature: domain Description: FocA Location: 573092-573869 bp Feature: domain Description: FocA Location: 573092-573869 bp Feature: gene Location: 574239-575405 bp Feature: domain Description: PRK09692 Location: 574248-575397 bp Feature: domain Description: PRK09692 Location: 574248-575397 bp Feature: gene Location: 576448-577632 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 576598-577177 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 576598-5771 77 bp Feature: gene Location: 577938-578159 bp Feature: gene Location: 578355-578627 bp Feature: domain Description: Ogr_Delta Location: 578379-578514 bp Feature: domain Description: Ogr_Delta Location: 578379-57851 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FocA (COG2116), PRK09692 (Integrase; provisional), RVT-Retrons, Ogr_Delta (pfam04606)

Seq: PYGX01000003.1 Enterobacter hormaechei strain AUH-ENM2 NODE_3_length_508362_cov_38.4356, whole genome shotgun sequence (508362 bp)
Overview 1 RT 1: 151653-161575 bp Neighborhood of RT #1 [151653, 161679] TIGR02687 YeeA RVT-UG5 nitrilase YeeA YeeA Feature: gene Location: 151653-154256 bp Feature: domain Description: TIGR02687 Location: 151671-154224 bp Feature: domain Description: TIGR02 687 Location: 151671-1542 2 4 bp Feature: gene Location: 154465-156240 bp Feature: domain Description: YeeA Location: 154516-156172 bp Feature: domain Description: YeeA Location: 154516-156172 bp Feature: gene Location: 156240-159242 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 156702-157188 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 156702 -157188 bp Feature: domain Description: nitrilase Location: 158454-159144 bp Feature: domain Description: nitrilase Location: 158454-159144 bp Feature: gene Location: 159273-159722 bp Feature: gene Location: 159745-161679 bp Feature: domain Description: YeeA Location: 160384-161095 bp Feature: domain Description: YeeA Location: 160384-161095 bp Feature: domain Description: YeeA Location: 161251-161575 bp Feature: domain Description: YeeA Location: 1612 51-161575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)

Seq: PYGX01000005.1 Enterobacter hormaechei strain AUH-ENM2 NODE_5_length_309785_cov_48.5156, whole genome shotgun sequence (309785 bp)
Overview 1 RT 1: 285669-290819 bp Neighborhood of RT #1 [285669, 290824] PHA02517 RVT-GII GIIM PHA02517 quinone_pig3 Feature: gene Location: 285669-285989 bp Feature: gene Location: 286601-287026 bp Feature: domain Description: PHA02517 Location: 286622-286961 bp Feature: domain Description: PHA02517 Location: 286622-286961 bp Feature: gene Location: 287618-289141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287891-288623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287891-288623 bp Feature: domain Description: GIIM Note: maturase Location: 288698-288896 bp Feature: domain Description: GIIM Note: maturase Location: 288698-288896 bp Feature: gene Location: 289264-289698 bp Feature: domain Description: PHA02517 Location: 289267-289690 bp Feature: domain Description: PHA02517 Location: 289267-289690 bp Feature: gene Location: 289823-290824 bp Feature: domain Description: quinone_pig3 Location: 289847-290819 bp Feature: domain Description: quinone_pig3 Location: 289847-290819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), quinone_pig3 (TIGR02824)