myRT

myRT report for GCA_003056955.1_ASM305695v1

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Seq: PYBZ01000002.1 Vibrio cholerae strain M1425 contig00002, whole genome shotgun sequence (660863 bp)
Overview 1 RT 1: 123393-128628 bp Neighborhood of RT #1 [123393, 128654] TIGR02646 COG3950 RVT-Retrons LysR Feature: gene Location: 123393-124010 bp Feature: domain Description: TIGR02646 Location: 123504-123888 bp Feature: domain Description: TIGR02646 Location: 1 23504-1 23888 bp Feature: gene Location: 124023-125645 bp Feature: domain Description: COG3950 Location: 124209-125640 bp Feature: domain Description: COG3950 Location: 1 24209-1 25640 bp Feature: gene Location: 125646-126593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125760-126357 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25760-1 26357 bp Feature: gene Location: 127519-127791 bp Feature: gene Location: 127794-128654 bp Feature: domain Description: LysR Location: 127800-128628 bp Feature: domain Description: LysR Location: 1 27800-1 28628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583)

Seq: PYBZ01000025.1 Vibrio cholerae strain M1425 contig00025, whole genome shotgun sequence (7235 bp)
Overview 1 RT 1: 975-5146 bp Neighborhood of RT #1 [975, 5146] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 975-1412 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 987-1380 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 987-1380 bp Feature: gene Location: 1573-1920 bp Feature: gene Location: 2061-3626 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2496-2973 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2 496-2 973 bp Feature: gene Location: 3762-4322 bp Feature: gene Location: 4472-5146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14