myRT

myRT report for GCA_003057435.1_ASM305743v1

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Seq: PXID01000036.1 Escherichia coli strain ECM-3 NODE_36_length_46994_cov_16.8993, whole genome shotgun sequence (46994 bp)
Overview 1 RT 1: 18426-22709 bp Neighborhood of RT #1 [18426, 22717] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 18426-19331 bp Feature: gene Location: 19589-19786 bp Feature: gene Location: 19817-20356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20147-20225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 47-20225 bp Feature: gene Location: 20384-20905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20390-20672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20390-20672 bp Feature: domain Description: GIIM Note: maturase Location: 20720-20900 bp Feature: domain Description: GIIM Note: maturase Location: 20720-20900 bp Feature: gene Location: 21227-21415 bp Feature: gene Location: 21455-22717 bp Feature: domain Description: YesM Location: 21968-22709 bp Feature: domain Description: YesM Location: 21 968-22709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: PXID01000057.1 Escherichia coli strain ECM-3 NODE_57_length_2272_cov_31.4643, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PXID01000007.1 Escherichia coli strain ECM-3 NODE_7_length_185064_cov_14.3991, whole genome shotgun sequence (185064 bp)
Overview 1 RT 1: 149819-155850 bp Neighborhood of RT #1 [149819, 155850] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 149819-150739 bp Feature: domain Description: AbiEii Location: 149861-150602 bp Feature: domain Description: AbiEii Location: 149861-150602 bp Feature: gene Location: 150726-151529 bp Feature: domain Description: AbiEi_3_N Location: 150759-151020 bp Feature: domain Description: AbiEi_3 _N Location: 150759-151020 bp Feature: domain Description: AbiEi_3 Location: 151032-151488 bp Feature: domain Description: AbiEi_3 Location: 15103 2-151488 bp Feature: gene Location: 151824-155033 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 152352-152841 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1523 52-152841 bp Feature: domain Description: nitrilase Location: 154347-154944 bp Feature: domain Description: nitrilase Location: 1543 47-154944 bp Feature: gene Location: 155194-155334 bp Feature: domain Description: Phage_ASH Location: 155221-155314 bp Feature: domain Description: Phage_ASH Location: 155221-1553 14 bp Feature: gene Location: 155380-155850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)