myRT

myRT report for GCA_003058425.1_ASM305842v1

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Seq: QBRV01000021.1 Escherichia coli strain MKU-A5B-MCR NODE_21_length_96022_cov_46.798286, whole genome shotgun sequence (96022 bp)
Overview 1 RT 1: 93828-95927 bp Neighborhood of RT #1 [93828, 95947] InsE PHA02517 RVT-GII Feature: gene Location: 93828-94154 bp Feature: domain Description: InsE Location: 93831-94152 bp Feature: domain Description: InsE Location: 93831 -941 52 bp Feature: gene Location: 94154-94633 bp Feature: domain Description: PHA02517 Location: 94214-94568 bp Feature: domain Description: PHA0251 7 Location: 9421 4-94568 bp Feature: gene Location: 95225-95947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95498-95927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95498-95927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: QBRV01000041.1 Escherichia coli strain MKU-A5B-MCR NODE_41_length_25936_cov_45.331501, whole genome shotgun sequence (25936 bp)
Overview 1 RT 1: 23574-25330 bp Neighborhood of RT #1 [23574, 25515] SmpB RVT-UG11 Feature: gene Location: 23574-24056 bp Feature: domain Description: SmpB Location: 23604-24051 bp Feature: domain Description: SmpB Location: 2 3604-2 4051 bp Feature: gene Location: 24190-24357 bp Feature: gene Location: 24742-25515 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 24877-25330 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 4877-2 5330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), RVT-UG11

Seq: QBRV01000006.1 Escherichia coli strain MKU-A5B-MCR NODE_6_length_234848_cov_44.446575, whole genome shotgun sequence (234848 bp)
Overview 1 RT 1: 226384-233073 bp Neighborhood of RT #1 [226384, 233195] XdhC PBP2_CrgA_like_5 RVT-Retrons DUF4145 Feature: gene Location: 226384-227340 bp Feature: domain Description: XdhC Location: 226462-227317 bp Feature: domain Description: XdhC Location: 226462-2273 17 bp Feature: gene Location: 227319-227729 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 227391-227703 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 2273 91-227703 bp Feature: gene Location: 229025-229924 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 229040-229469 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 229040-229469 bp Feature: gene Location: 231268-231648 bp Feature: gene Location: 232374-233195 bp Feature: domain Description: DUF4145 Location: 232767-233073 bp Feature: domain Description: DUF4145 Location: 23 2767-23 3 073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-Retrons, DUF4145 (pfam13643)