myRT

myRT report for GCA_003062295.1_ASM306229v1

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Seq: PYCN01000135.1 Bradyrhizobium algeriense strain RST91 NODE_136_length_1536_cov_1.30802_ID_6751, whole genome shotgun sequence (1536 bp)
Overview 1 RT 1: 1-1494 bp Neighborhood of RT #1 [1, 1535] RVT_N RVT-GII HTH_17 HTH_17 Feature: gene Location: 1-414 bp Feature: RT Description: RVT_N Location: 4-112 bp Feature: RT Description: RVT_N Location: 4-1 1 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166-403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 66-403 bp Feature: gene Location: 426-1535 bp Feature: domain Description: HTH_17 Location: 1197-1320 bp Feature: domain Description: HTH_1 7 Location: 1 1 97-1 320 bp Feature: domain Description: HTH_17 Location: 1371-1494 bp Feature: domain Description: HTH_1 7 Location: 1 371 -1 494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HTH_17 (pfam12728)

Seq: PYCN01000143.1 Bradyrhizobium algeriense strain RST91 NODE_144_length_1314_cov_0.887953_ID_7457, whole genome shotgun sequence (1314 bp)
Overview 1 RT 1: 236-1313 bp Neighborhood of RT #1 [236, 1312] RVT-GII Feature: gene Location: 236-439 bp Feature: gene Location: 719-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 827-1313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 7-1313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYCN01000094.1 Bradyrhizobium algeriense strain RST91 NODE_94_length_5631_cov_126.407_ID_5656, whole genome shotgun sequence (5631 bp)
Overview 1 RT 1: 953-5397 bp Neighborhood of RT #1 [953, 5441] Phage_int_SAM_4 INT_IntI_C RVT-GII GIIM COG3547 Feature: gene Location: 953-1261 bp Feature: gene Location: 1258-2094 bp Feature: domain Description: Phage_int_SAM_4 Location: 1279-1510 bp Feature: domain Description: Phage_int_SAM_4 Location: 1279-1510 bp Feature: domain Description: INT_IntI_C Location: 1558-2047 bp Feature: domain Description: INT_IntI_C Location: 1558-2047 bp Feature: gene Location: 2662-4053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3007-3625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 007-3 625 bp Feature: domain Description: GIIM Note: maturase Location: 3679-3895 bp Feature: domain Description: GIIM Note: maturase Location: 3 679-3 895 bp Feature: gene Location: 4269-5441 bp Feature: domain Description: COG3547 Location: 4461-5397 bp Feature: domain Description: COG3 547 Location: 4461-53 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: PYCN01000095.1 Bradyrhizobium algeriense strain RST91 NODE_96_length_4841_cov_138.408_ID_5614, whole genome shotgun sequence (4841 bp)
Overview 1 RT 1: 2-2448 bp Neighborhood of RT #1 [2, 2448] rve_3 RVT-GII Feature: gene Location: 2-235 bp Feature: domain Description: rve_3 Location: 5-152 bp Feature: domain Description: rve_3 Location: 5-152 bp Feature: gene Location: 286-453 bp Feature: gene Location: 545-1996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1562 bp Feature: gene Location: 2065-2256 bp Feature: gene Location: 2311-2448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII